RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 RPL22P35268 128 aaKnown RBP14.25□□□□□ -0.13
CTSD-202ENST00000367196 SARNPP82979 210 aaKnown RBP14.25□□□□□ -0.13
CTSD-202ENST00000367196 ESPL1Q14674 2120 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 IRAK1BP1Q5VVH5 260 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 TTLL10Q6ZVT0 673 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 VRK3Q8IV63 474 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 MCATQ8IVS2 390 aaKnown RBP14.25□□□□□ -0.13
CTSD-202ENST00000367196 IQCKQ8N0W5 287 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 LINC01555Q8NAE3 123 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 LKAAEAR1Q8TD35 194 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 SELENOSQ9BQE4 189 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 MENTQ9BUN1 341 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 WDR54Q9H977 334 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 ATP13A2Q9NQ11 1180 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 TREX1Q9NSU2 369 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 CUEDC1Q9NWM3 386 aaPredicted RBP14.25□□□□□ -0.13
CTSD-202ENST00000367196 P4HTMQ9NXG6 502 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 IL1RAPL1Q9NZN1 696 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 MAP10Q9P2G4 905 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 VPS9D1Q9Y2B5 631 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 ANKRD12Q6UB98 2062 aa14.25□□□□□ -0.13
CTSD-202ENST00000367196 BLACEA4D250 179 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 AGPSO00116 658 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 DSCR3O14972 297 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 HCRTR1O43613 425 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 CCDC175P0C221 793 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 UQCRFS1P47985 274 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 EIF3BP55884 814 aaKnown RBP14.24□□□□□ -0.13
CTSD-202ENST00000367196 AIMP2Q13155 320 aaKnown RBP14.24□□□□□ -0.13
CTSD-202ENST00000367196 RAPSNQ13702 412 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 SLC9A5Q14940 896 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 FAM214AQ32MH5 1076 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 FIGLAQ6QHK4 219 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 TAX1BP1Q86VP1 789 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 KRT222Q8N1A0 295 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 RBMXL3Q8N7X1 1067 aaKnown RBP14.24□□□□□ -0.13
CTSD-202ENST00000367196 TRIM58Q8NG06 486 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 IL17FQ96PD4 163 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 MFRPQ9BY79 579 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 ILKAPQ9H0C8 392 aaPredicted RBP14.24□□□□□ -0.13
CTSD-202ENST00000367196 P2RY12Q9H244 342 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 SLC26A1Q9H2B4 701 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 CUTCQ9NTM9 273 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 SPATA7Q9P0W8 599 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 TTC7AQ9ULT0 858 aaPredicted RBP14.24□□□□□ -0.13
CTSD-202ENST00000367196 B3GNT3Q9Y2A9 372 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 SHANK1Q9Y566 2161 aa14.24□□□□□ -0.13
CTSD-202ENST00000367196 NRDCO43847 1150 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 SRPX2O60687 465 aaPredicted RBP14.23□□□□□ -0.13
CTSD-202ENST00000367196 FGGP02679 453 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 ZSCAN5DPP0CG00 497 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 PAMP19021 973 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 TPSB2P20231 275 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 MMP11P24347 488 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 ATP5DP30049 168 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 GCGRP47871 477 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 SOX8P57073 446 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 GRB7Q14451 532 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 TPSAB1Q15661 275 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 LRRC8BQ6P9F7 803 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 IGFL3Q6UXB1 125 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 ZNF662Q6ZS27 426 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 PRUNE1Q86TP1 453 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 LDB1Q86U70 411 aaPredicted RBP14.23□□□□□ -0.13
CTSD-202ENST00000367196 ZADH2Q8N4Q0 377 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 C2orf73Q8N5S3 287 aaPredicted RBP14.23□□□□□ -0.13
CTSD-202ENST00000367196 HMGCLL1Q8TB92 370 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 PSMG3-AS1Q96PY0 264 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 TCF12Q99081 682 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 KIFC1Q9BW19 673 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 ENAMQ9NRM1 1142 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 MARCH4Q9P2E8 410 aaPredicted RBP14.23□□□□□ -0.13
CTSD-202ENST00000367196 CDC23Q9UJX2 597 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 CCDC88CQ9P219 2028 aa14.23□□□□□ -0.13
CTSD-202ENST00000367196 CYSRT1A8MQ03 144 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 PHF2O75151 1096 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 C1orf105O95561 183 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 ONECUT2O95948 504 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 ESR1P03372 595 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 UMODP07911 640 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 ITGA3P26006 1051 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 ADARP55265 1226 aaKnown RBP14.22□□□□□ -0.13
CTSD-202ENST00000367196 CRADDP78560 199 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 SIX1Q15475 284 aaPredicted RBP14.22□□□□□ -0.13
CTSD-202ENST00000367196 FCRL6Q6DN72 434 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 OVCH1Q7RTY7 1134 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 PPP1R32Q7Z5V6 425 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 FAM20CQ8IXL6 584 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 LMNTD1Q8N9Z9 388 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 Q8NA96 180 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 SSC4DQ8WTU2 575 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 COG1Q8WTW3 980 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 LZTFL1Q9NQ48 299 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 FAM114A2Q9NRY5 505 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 SEMA3GQ9NS98 782 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 UTP6Q9NYH9 597 aaKnown RBP14.22□□□□□ -0.13
CTSD-202ENST00000367196 CIDEBQ9UHD4 219 aa14.22□□□□□ -0.13
CTSD-202ENST00000367196 KLHL20Q9Y2M5 609 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms