RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 MID1O15344 667 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 HTRA2O43464 458 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PIRTP0C851 137 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 BMP2P12643 396 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PRKAR2AP13861 404 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 GRK4P32298 578 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SKIV2LQ15477 1246 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ULK3Q6PHR2 472 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 GCNT7Q6ZNI0 430 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMIEQ8NEW7 156 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 FBXO22Q8NEZ5 403 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 NRG4Q8WWG1 115 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 IPCEF1Q8WWN9 437 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PANX1Q96RD7 426 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 AIG1Q9NVV5 245 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 RDH8Q9NYR8 311 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMEM181Q9P2C4 612 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 GNG14A0A1W2PPG7 69 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 H3BNH8 94 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PSKH1P11801 424 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF24P17028 368 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PPP2R1BP30154 601 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 TXNL4AP83876 142 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 RIPPLY1Q0D2K3 151 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ADGRF1Q5T601 910 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 NAPRTQ6XQN6 538 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PAQR9Q6ZVX9 377 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CEP97Q8IW35 865 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CPNE9Q8IYJ1 553 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMEM199Q8N511 208 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 C10orf53Q8N6V4 93 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 NPWQ8N729 165 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PPP1R13LQ8WUF5 828 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF382Q96SR6 550 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PFDN5Q99471 154 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 NLNQ9BYT8 704 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMLHEQ9NVH6 421 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PHF24Q9UPV7 400 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CLCA2Q9UQC9 943 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ANGPT4Q9Y264 503 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 RUVBL1Q9Y265 456 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 AIREO43918 545 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CDK14O94921 469 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 AP2A2O94973 939 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 HSPA7P48741 367 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 RBBP4Q09028 425 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SEMA3BQ13214 749 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 GNA13Q14344 377 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PON2Q15165 354 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CYP2A13Q16696 494 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 WDR45BQ5MNZ6 344 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 KDELC1Q6UW63 502 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 TMPRSS11AQ6ZMR5 421 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 GPRIN1Q7Z2K8 1008 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ISCA2Q86U28 154 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 FAM156AQ8NDB6 213 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 VPS35Q96QK1 796 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SYT17Q9BSW7 474 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SLC32A1Q9H598 525 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 NKIRAS2Q9NYR9 191 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 AASSQ9UDR5 926 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PLD2O14939 933 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 MPZL2O60487 215 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 NTRK1P04629 796 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CYP4B1P13584 511 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 VARSP26640 1264 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 OR1D2P34982 312 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ADRA1AP35348 466 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ALDH3A2P51648 485 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 AP3S2P59780 193 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CYP4F8P98187 520 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 TGM3Q08188 693 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 BNIP3Q12983 259 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 E2F2Q14209 437 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 COLEC12Q5KU26 742 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF517Q6ZMY9 492 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CIR1Q86X95 450 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF431Q8TF32 576 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PPP1R14AQ96A00 147 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF347Q96SE7 839 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 HTATIP2Q9BUP3 242 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 NEK6Q9HC98 313 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 IGSF5Q9NSI5 407 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZDHHC3Q9NYG2 299 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PCDHB3Q9Y5E6 796 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 EIF3FO00303 357 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PDPK1O15530 556 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SOCS5O75159 536 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SCGNO76038 276 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 PRAMEF1O95521 474 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ZNF3P17036 446 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 KIR3DL1P43629 444 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 GSK3BP49841 420 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SEMA3AQ14563 771 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ATP6AP1Q15904 470 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SCIMPQ6UWF3 145 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 ARHGAP12Q8IWW6 846 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 SIDT2Q8NBJ9 832 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 GAL3ST3Q96A11 431 aa5.25□□□□□ -1.57
CDC42BPA-204ENST00000366767 CGREF1Q99674 301 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms