RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 BRAT1Q6PJG6 821 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 OR10G2Q8NGC3 310 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 OR8D1Q8WZ84 308 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 SPATA7Q9P0W8 599 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 MRPL42Q9Y6G3 142 aaKnown RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 PRAMEF11O60813 436 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 TSPAN9O75954 239 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 CEACAM7Q14002 265 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 C6orf136Q5SQH8 315 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 SDR39U1Q9NRG7 319 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 ASF1AQ9Y294 204 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 SIX3O95343 332 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 WEE1P30291 646 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 PITPNAQ00169 270 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZDHHC3Q9NYG2 299 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 PRNPP04156 253 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 FMO3P31513 532 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 KCNC4Q03721 635 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 CHMP1BQ7LBR1 199 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 NLE1Q9NVX2 485 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 PHF24Q9UPV7 400 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 MRPS33Q9Y291 106 aaKnown RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 A0A1W2PPW3 197 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 KCNC3Q14003 757 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF630Q2M218 657 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 TIGD5Q53EQ6 642 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 C6orf141Q5SZD1 244 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 MFSD4BQ5TF39 518 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 SDHAF4Q5VUM1 108 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 ADNP2Q6IQ32 1131 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 NARS2Q96I59 477 aaKnown RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 CKLFQ9UBR5 152 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 SOCS5O75159 536 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 SPTBP11277 2137 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 HSD3B1P14060 373 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 HSD3B2P26439 372 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 RGS8P57771 180 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 PIK3R6Q5UE93 754 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 FAM20CQ8IXL6 584 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 KLHL6Q8WZ60 621 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF597Q96LX8 424 aa11.54□□□□□ -0.56
CDC42BPA-202ENST00000366764 NIPSNAP2O75323 286 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ADAM17P78536 824 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 E2F2Q14209 437 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 FUT10Q6P4F1 479 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF517Q6ZMY9 492 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 TMC8Q8IU68 726 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 NEK6Q9HC98 313 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ITGA10O75578 1167 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 FYNP06241 537 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CHRNA4P43681 627 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ALFQ53S48 1182 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ATAD1Q8NBU5 361 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 GTF2A1LQ9UNN4 478 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 PGLSO95336 258 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 TPGS2Q68CL5 300 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CHST15Q7LFX5 561 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 OAFQ86UD1 273 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 RERGQ96A58 199 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CMTM7Q96FZ5 175 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 SORT1Q99523 831 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 TESMINQ9Y4I5 508 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 MAP4K5Q9Y4K4 846 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 G3V2L1 256 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 GADD45GO95257 159 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 RETP07949 1114 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 TXNL4AP83876 142 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 HSF2Q03933 536 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC10A7Q0GE19 358 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 C2orf80Q0P641 193 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 MYLK3Q32MK0 819 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CGB2Q6NT52 195 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 SCAMP5Q8TAC9 235 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 EFHD2Q96C19 240 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 MANBAO00462 879 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZW10O43264 779 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 AGR2O95994 175 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 SERPINA3P01011 423 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 GNRH1P01148 92 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 INHBCP55103 352 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 UFM1P61960 85 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 FBXL20Q96IG2 436 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZSCAN5AQ9BUG6 496 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 B3GNT3Q9Y2A9 372 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 PRSS51A0A1B0GVH4 220 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 FABP12A6NFH5 140 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 KHDRBS3O75525 346 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CD247P20963 164 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ATP12AP54707 1039 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 LGI4Q8N135 537 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 MEIOBQ8N635 442 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 C11orf24Q96F05 449 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 AGPAT4Q9NRZ5 378 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 SNX10Q9Y5X0 201 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNFX1Q9P2E3 1918 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 PQBP1O60828 265 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 LDOC1O95751 146 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 NUMBP49757 651 aa11.53□□□□□ -0.56
CDC42BPA-202ENST00000366764 CLCN4P51793 760 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms