RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PDE12Q6L8Q7 609 aaKnown RBP16.41■□□□□ 0.22
NID1-202ENST00000366595 CPA6Q8N4T0 437 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 ASCC1Q8N9N2 400 aaKnown RBP16.41■□□□□ 0.22
NID1-202ENST00000366595 OR2T29Q8NH02 315 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 NECAB3Q96P71 396 aaPredicted RBP16.41■□□□□ 0.22
NID1-202ENST00000366595 LRRN3Q9H3W5 708 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 GDAP2Q9NXN4 497 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 FLRT1Q9NZU1 646 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 MAGI3Q5TCQ9 1506 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 SLITRK5O94991 958 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 H1F0P07305 194 aaKnown RBP16.41■□□□□ 0.22
NID1-202ENST00000366595 GKN3PP0CG01 181 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 MAN2A2P49641 1150 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 HERV-K104P61576 105 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 KCTD19Q17RG1 926 aaPredicted RBP16.41■□□□□ 0.22
NID1-202ENST00000366595 BRSK1Q8TDC3 778 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 MMP27Q9H306 513 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 ZIM2Q9NZV7 527 aa16.41■□□□□ 0.22
NID1-202ENST00000366595 A0A1W2PRB8 838 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 APODP05090 189 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 CSN2P05814 226 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 HSD11B1P28845 292 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 SLC18A2Q05940 514 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 BAIAP2L2Q6UXY1 529 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 ANKRD46Q86W74 232 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 PROKR2Q8NFJ6 384 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 OR5B17Q8NGF7 314 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 TAS2R3Q9NYW6 316 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 EDARQ9UNE0 448 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 C13orf42A0A1B0GVH6 325 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 RPA4Q13156 261 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 PTGR1Q14914 329 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 SYT16Q17RD7 645 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 TOR1AIP1Q5JTV8 583 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 SPIN3Q5JUX0 258 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 NBPF12Q5TAG4 269 aaPredicted RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 LMLNQ96KR4 655 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 RGCCQ9H4X1 137 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 KCNN3Q9UGI6 736 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 GLI2P10070 1586 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 FOSL1P15407 271 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 L1CAMP32004 1257 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 NSG1P42857 185 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 FKBP1AP62942 108 aaKnown RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 OTOP3Q7RTS5 596 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 TMEM126BQ8IUX1 230 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 ZSCAN4Q8NAM6 433 aaPredicted RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 ADAD1Q96M93 576 aaKnown RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 OR5B12Q96R08 314 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 TSNAXQ99598 290 aaKnown RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 EIF2B4Q9UI10 523 aaKnown RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 B4GALT4O60513 344 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 ZNF267Q14586 743 aaPredicted RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 TARBP2Q15633 366 aaKnown RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 SLC8B1Q6J4K2 584 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 ARL9Q6T311 187 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 TMEM209Q96SK2 561 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 OR10A4Q9H209 315 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 IGFLR1Q9H665 355 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 FANCFQ9NPI8 374 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 A0A0U1RQJ8 604 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 LYPLA2O95372 231 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 FPR1P21462 350 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 RPS3P23396 243 aaKnown RBP eCLIP16.4■□□□□ 0.225e-8■■■□□ 16.1
NID1-202ENST00000366595 RBMXP38159 391 aaKnown RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 PGDP52209 483 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 MTPNP58546 118 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 MINDY4Q4G0A6 757 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 LCN9Q8WX39 176 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 AURKBQ96GD4 344 aaPredicted RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 ACTR6Q9GZN1 396 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 UNKLQ9H9P5 680 aaKnown RBP16.4■□□□□ 0.22
NID1-202ENST00000366595 B3GAT2Q9NPZ5 323 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 ENAMQ9NRM1 1142 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 SH2B3Q9UQQ2 575 aa16.4■□□□□ 0.22
NID1-202ENST00000366595 LOC100509620A0A075B734 347 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 E9PAM4 449 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 K7EPI3 171 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 TNFRSF10BO14763 440 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 DSTNP60981 165 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 DNASE1L3Q13609 305 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 TSTQ16762 297 aaKnown RBP16.39■□□□□ 0.21
NID1-202ENST00000366595 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.39■□□□□ 0.211e-6■■□□□ 14.3
NID1-202ENST00000366595 BTBD16Q32M84 506 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 DCDC5Q6ZRR9 648 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 SCGB1C1Q8TD33 95 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 GPR151Q8TDV0 419 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 ZNF514Q96K75 400 aaPredicted RBP16.39■□□□□ 0.21
NID1-202ENST00000366595 ZNF641Q96N77 438 aaPredicted RBP16.39■□□□□ 0.21
NID1-202ENST00000366595 GAL3ST4Q96RP7 486 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 EBPLQ9BY08 206 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 NMUR1Q9HB89 426 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 EXOSC1Q9Y3B2 195 aaKnown RBP16.39■□□□□ 0.21
NID1-202ENST00000366595 E7EQ34 232 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 INMT-MINDY4F8WBC2 141 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 IFNA10P01566 189 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 IL3P08700 152 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 SMIM10L2AP0DMW4 78 aa16.39■□□□□ 0.21
NID1-202ENST00000366595 SMIM10L2BP0DMW5 78 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms