RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 DYRK4Q9NR20 520 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 HAO1Q9UJM8 370 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 PADI4Q9UM07 663 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 HS3ST3A1Q9Y663 406 aa10.97□□□□□ -0.65
CSNK1E-202ENST00000366216 KERAO60938 352 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 SMIM24O75264 130 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 DCTN3O75935 186 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 KIAA0754O94854 1291 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 PCDH8O95206 1070 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 TSPAN12O95859 305 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 CELA2BP08218 269 aaPredicted RBP10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ELFN1P0C7U0 828 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 TPBGLP0DKB5 382 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ADRB3P13945 408 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ITIH1P19827 911 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 CCKBRP32239 447 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ETV5P41161 510 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 CD97P48960 835 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ARFIP2P53365 341 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 IL2P60568 153 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 SF3A3Q12874 501 aaKnown RBP eCLIP10.96□□□□□ -0.652e-12■■■■■ 44.5
CSNK1E-202ENST00000366216 RCN2Q14257 317 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 CCDC121Q6ZUS5 278 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 Q6ZVL8 140 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ZNF765Q7L2R6 523 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 NLRP8Q86W28 1048 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ATCAYQ86WG3 371 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 GBP7Q8N8V2 638 aaPredicted RBP10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 SIDT2Q8NBJ9 832 aaKnown RBP10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 GIMAP7Q8NHV1 300 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 DTD2Q96FN9 168 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 CNDP1Q96KN2 507 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 COQ10AQ96MF6 247 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 TMEM74Q96NL1 305 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 VPS35Q96QK1 796 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 PANX3Q96QZ0 392 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ATOH8Q96SQ7 321 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 SLC30A3Q99726 388 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 SPATA16Q9BXB7 569 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 UNKQ9C0B0 810 aaKnown RBP10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 STN1Q9H668 368 aaKnown RBP10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ALG9Q9H6U8 611 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 ZNF395Q9H8N7 513 aaPredicted RBP10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 FOXJ2Q9P0K8 574 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 GALPQ9UBC7 116 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 SPASTQ9UBP0 616 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 TMCO1Q9UM00 188 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 DNAJC16Q9Y2G8 782 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 LOXL2Q9Y4K0 774 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 PRSS21Q9Y6M0 314 aa10.96□□□□□ -0.65
CSNK1E-202ENST00000366216 PIKFYVEQ9Y2I7 2098 aa10.96□□□□□ -0.66
CSNK1E-202ENST00000366216 A0A1W2PQM1 296 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 SYCE1LA8MT33 242 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 A8MT66 165 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 LMO7DNF2Z398 122 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 AGRPO00253 132 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 EIF3FO00303 357 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 LYPLA1O75608 230 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 AP2A2O94973 939 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 SLC25A14O95258 325 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 HSPA4LO95757 839 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 ALOX15P16050 662 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 GM2AP17900 193 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 IMPDH1P20839 514 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 ARRB2P32121 409 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 ETV3P41162 512 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 RABIFP47224 123 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 KCNC1P48547 511 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 RGS4P49798 205 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 LIG3P49916 1009 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 NAGLUP54802 743 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 NAA20P61599 178 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 CCL7P80098 99 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 B4GALNT1Q00973 533 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 GALNT1Q10472 559 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 PRKAA1Q13131 559 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 C1orf61Q13536 156 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 OR4D1Q15615 310 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 LACTB2Q53H82 288 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 PRRT3Q5FWE3 981 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 SPDYAQ5MJ70 313 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 GPRC6AQ5T6X5 926 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 KIRREL3Q8IZU9 778 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 DDHD1Q8NEL9 900 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 C9orf43Q8TAL5 461 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 BTN2A2Q8WVV5 523 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 STON2Q8WXE9 905 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 TMEM159Q96B96 161 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 L3HYPDHQ96EM0 354 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 LINGO1Q96FE5 620 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 THOC1Q96FV9 657 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 RMDN2Q96LZ7 410 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 TRMOQ9BU70 441 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 RIOK2Q9BVS4 552 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 TMEM120AQ9BXJ8 343 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 SLC17A9Q9BYT1 436 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 ILKAPQ9H0C8 392 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 ABCG8Q9H221 673 aa10.95□□□□□ -0.66
CSNK1E-202ENST00000366216 ZNF71Q9NQZ8 489 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms