RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 PSMD11O00231 422 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 KHDRBS3O75525 346 aaKnown RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 HOXC12P31275 282 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 ZNF846Q147U1 533 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 GPRC6AQ5T6X5 926 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 FRRS1Q6ZNA5 592 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 C1orf52Q8N6N3 182 aaKnown RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 PXYLP1Q8TE99 480 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 TRIM63Q969Q1 353 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 C1orf74Q96LT6 269 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 PDCD10Q9BUL8 212 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 GTPBP2Q9BX10 602 aaKnown RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SMG9Q9H0W8 520 aaKnown RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 ELAC1Q9H777 363 aaKnown RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 CXorf49A8MYA2 514 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 DCLK1O15075 740 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 GRID2O43424 1007 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 RHOP08100 348 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 KCNA5P22460 613 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 EDNRBP24530 442 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 STC1P52823 247 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 GRM2Q14416 872 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 PTCHD3Q3KNS1 767 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SPIN4Q56A73 249 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 DCAF12L1Q5VU92 463 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 TMEM214Q6NUQ4 689 aaKnown RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 TMIGD1Q6UXZ0 262 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 AHSA2Q719I0 299 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SVOPLQ8N434 492 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 GPR22Q99680 433 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 EBF4Q9BQW3 602 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 CTPS2Q9NRF8 586 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 LCHNA4D1U4 455 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 CDC7O00311 574 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 COCHO43405 550 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SSNA1O43805 119 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 TPST2O60704 377 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 ALPPP05187 535 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 KLK3P07288 261 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SLC7A1P30825 629 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 TMEM198Q66K66 360 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 AGTRAPQ6RW13 159 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 FAM43BQ6ZT52 329 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 ZNF572Q7Z3I7 529 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 ADGRG6Q86SQ4 1221 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 DGCR14Q96DF8 476 aaKnown RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 COL21A1Q96P44 957 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 ZNF347Q96SE7 839 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 POMPQ9Y244 141 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 TEX264Q9Y6I9 313 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 COL1A1P02452 1464 aaPredicted RBP10.08□□□□□ -0.8
ZNF548-202ENST00000366197 CLIC1O00299 241 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SLC30A4O14863 429 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 DLX3O60479 287 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 IFNA6P05013 189 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 IQCF3P0C7M6 154 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 ZNF823P16415 610 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 FOXN2P32314 431 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 PIK3CBP42338 1070 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 PPP2R2BQ00005 443 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 ZCCHC12Q6PEW1 402 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SMPDL3BQ92485 455 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 KLHDC7BQ96G42 594 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 NDC1Q9BTX1 674 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 OR51V1Q9H2C8 321 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SLC35C2Q9NQQ7 365 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 KCTD3Q9Y597 815 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 DGKBQ9Y6T7 804 aa10.08□□□□□ -0.8
ZNF548-202ENST00000366197 SOCS5O75159 536 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 RSL1D1O76021 490 aaKnown RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 PAPSS2O95340 614 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 SRPRAP08240 638 aaKnown RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 RAP2AP10114 183 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 RPP38P78345 283 aaKnown RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 SEMA3AQ14563 771 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 MLIPQ5VWP3 458 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 GALNT7Q86SF2 657 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 OR4E2Q8NGC2 313 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 ZNF641Q96N77 438 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 ZNF570Q96NI8 536 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 POLR2J3Q9H1A7 115 aaKnown RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 PLEKHA1Q9HB21 404 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 LTN1O94822 1766 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 NDUFS4O43181 175 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 PRAMEF12O95522 483 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 AGR2O95994 175 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 PAK4O96013 591 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 CD2P06729 351 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 FAUP35544 74 aaKnown RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 MLLT3P42568 568 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 RBM20Q5T481 1227 aaKnown RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 SMARCD3Q6STE5 483 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 THOC6Q86W42 341 aaKnown RBP10.07□□□□□ -0.8
ZNF548-202ENST00000366197 SLC30A8Q8IWU4 369 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 PQLC3Q8N755 202 aa10.07□□□□□ -0.8
ZNF548-202ENST00000366197 GLIS1Q8NBF1 620 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms