RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MRPS27Q92552 414 aaKnown RBP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 C3orf30Q96M34 536 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 CFAP57Q96MR6 1250 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 C1QTNF7Q9BXJ2 289 aa5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 RAVER2Q9HCJ3 691 aaKnown RBP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 NOL7Q9UMY1 257 aaKnown RBP5.43□□□□□ -1.54
RNU4-39P-201ENST00000362455 TRANK1O15050 2925 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 IGLV5-52A0A0A0MRZ9 124 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 A0A0U1RQG5 324 aaPredicted RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 EDDM13A0A1B0GTR0 161 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 A0A1W2PP11 408 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC16A5O15375 505 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 PRAMEF11O60813 436 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLCO2B1O94956 709 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 RPN1P04843 607 aaKnown RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 CORO1AP31146 461 aaKnown RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 SNRPEP62304 92 aaKnown RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 CRYZQ08257 329 aaKnown RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 SETMARQ53H47 684 aaPredicted RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 ALS2CLQ60I27 953 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 CCNI2Q6ZMN8 369 aaPredicted RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 GALNTL5Q7Z4T8 443 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 PELI3Q8N2H9 469 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC5A8Q8N695 610 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 THAP6Q8TBB0 222 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 MTBPQ96DY7 904 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 SPATA17Q96L03 361 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 GLT1D1Q96MS3 346 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF48Q96MX3 618 aaPredicted RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 QRFPRQ96P65 431 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 NEK1Q96PY6 1258 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 NAA11Q9BSU3 229 aaPredicted RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 TEX13BQ9BXU2 312 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 BOLA2Q9H3K6 86 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC38A10Q9HBR0 1119 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 NYAP2Q9P242 653 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 RCC2Q9P258 522 aaKnown RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 DDX25Q9UHL0 483 aaKnown RBP5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 ANAPC5Q9UJX4 755 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 MTCH2Q9Y6C9 303 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 RLFQ13129 1914 aa5.42□□□□□ -1.54
RNU4-39P-201ENST00000362455 PLK4O00444 970 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 CLDN14O95500 239 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 GLUD1P00367 558 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 S1PR1P21453 382 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 CDC25AP30304 524 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 GLUD2P49448 558 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 BRWD1-AS2P59051 145 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 CD81P60033 236 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 SNAP25P60880 206 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 PDE1BQ01064 536 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 ITGA7Q13683 1181 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 MELKQ14680 651 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 GPNMBQ14956 572 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 HECTD3Q5T447 861 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 C1QTNF12Q5T7M4 302 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 PSRC1Q6PGN9 363 aaPredicted RBP5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 C1QL2Q7Z5L3 287 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 ITPRIPQ8IWB1 547 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF595Q8IYB9 648 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 THNSL1Q8IYQ7 743 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC38A5Q8WUX1 472 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 ERLEC1Q96DZ1 483 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 FAM122AQ96E09 287 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 SPACA9Q96E40 222 aaPredicted RBP5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 FER1L6-AS2Q96M78 137 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 CAMK1GQ96NX5 476 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 OR1F2PQ96R84 312 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC22A12Q96S37 553 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 FAM129AQ9BZQ8 928 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 ANKZF1Q9H8Y5 726 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 CNOT10Q9H9A5 744 aaKnown RBP5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 MRPL44Q9H9J2 332 aaKnown RBP5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 CLIP2Q9UDT6 1046 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 TUBE1Q9UJT0 475 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF236Q9UL36 1845 aa5.41□□□□□ -1.54
RNU4-39P-201ENST00000362455 A0A0G2JMZ2 1700 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 A0A0B4J293 547 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 MID1O15344 667 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 PRDM1O75626 825 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 KDM4BO94953 1096 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 FYNP06241 537 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 CA3P07451 260 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 SCG2P13521 617 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 PFKFB1P16118 471 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 GABRA5P31644 462 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 COPB2P35606 906 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 RAB28P51157 221 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 CTSCP53634 463 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 TERF1P54274 439 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 COG7P83436 770 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 PPARDQ03181 441 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 CALCRLQ16602 461 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 SBK1Q52WX2 424 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 ARMC4Q5T2S8 1044 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 LRCH2Q5VUJ6 765 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF549Q6P9A3 640 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 TMEM173Q86WV6 379 aaPredicted RBP5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 ERC1Q8IUD2 1116 aa5.4□□□□□ -1.54
RNU4-39P-201ENST00000362455 MAP7D3Q8IWC1 876 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms