RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ACVR2AP27037 513 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 CDKN2CP42773 168 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 CASP6P55212 293 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 E2F1Q01094 437 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 PON3Q15166 354 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF181Q2M3W8 571 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 MSANTD2Q6P1R3 559 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 LRRN4Q8WUT4 740 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 AUTS2Q8WXX7 1259 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 POLMQ9NP87 494 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 DNAJB9Q9UBS3 223 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 SLIT1O75093 1534 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 BHMG1C9JSJ3 638 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 CAPZA1P52907 286 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 S100A7AQ86SG5 101 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 C3orf58Q8NDZ4 430 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 FBXO22Q8NEZ5 403 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 POC1BQ8TC44 478 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 XAGE5Q8WWM1 108 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 RHBDF1Q96CC6 855 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 RNF208Q9H0X6 261 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 C9JVG2 144 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 GLUD1P00367 558 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 CYP3A7P24462 503 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 MAGEA11P43364 429 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ENTPD1P49961 510 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 KCNC2Q96PR1 638 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 TUBG2Q9NRH3 451 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 TIMM13Q9Y5L4 95 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 TMEM150CB9EJG8 249 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 C8GP07360 202 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 MATN1P21941 496 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ACTR1AP61163 376 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 CRTC1Q6UUV9 634 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 COX18Q8N8Q8 333 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 TMEM125Q96AQ2 219 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 DDX4Q9NQI0 724 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 FBXO5Q9UKT4 447 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 A0A1B0GVM2 712 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 TCAF2A6NFQ2 919 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 SEPT4O43236 478 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 GADD45GO95257 159 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 CSF2P04141 144 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ADORA2AP29274 412 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF132P52740 706 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF45Q02386 682 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 SEC23BQ15437 767 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 ALG1LQ6GMV1 187 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 MON1AQ86VX9 555 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 PHTF2Q8N3S3 785 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 EXOC2Q96KP1 924 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 C19orf25Q9UFG5 118 aaPredicted RBP12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 HCN2Q9UL51 889 aa12.95□□□□□ -0.34
SRGAP3-201ENST00000360413 SALL1Q9NSC2 1324 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TLL1O43897 1013 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 GOT1P17174 413 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ALAS2P22557 587 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 MPIP34949 423 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TLR1Q15399 786 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TMPRSS11BQ86T26 416 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 SNX29P2Q8IUI4 249 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TUBA1CQ9BQE3 449 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TVP23BQ9NYZ1 205 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 PPM1HQ9ULR3 514 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 SLITRK5O94991 958 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 GRIA2P42262 883 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 MPP1Q00013 466 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TARDBPQ13148 414 aaKnown RBP eCLIP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ZER1Q7Z7L7 766 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ANKRD46Q86W74 232 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 PGLYRP2Q96PD5 576 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 SNRNP25Q9BV90 132 aaKnown RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF282Q9UDV7 671 aaPredicted RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ARL5AQ9Y689 179 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 SCAMP1O15126 338 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 CALCAP01258 141 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 IL7RP16871 459 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ENDOUP21128 410 aaKnown RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 RYKP34925 604 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TLE2Q04725 743 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 NOMO2Q5JPE7 1267 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 IL23RQ5VWK5 629 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 ADGRD1Q6QNK2 874 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 WDSUB1Q8N9V3 476 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 MAELQ96JY0 434 aaKnown RBP12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 MIPEPQ99797 713 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 FAM83DQ9H4H8 585 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 LRRC10BA6NIK2 292 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 TSTD3H0UI37 97 aa12.94□□□□□ -0.34
SRGAP3-201ENST00000360413 GMFGO60234 142 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms