RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 ACTL8Q9H568 366 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 SAGE1Q9NXZ1 904 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 IFT80Q9P2H3 777 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 RPS6KA6Q9UK32 745 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 INTS6Q9UL03 887 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 CEPT1Q9Y6K0 416 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 XYLBO75191 536 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 PTPN2P17706 415 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 CTSOP43234 321 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 PNLIPRP1P54315 467 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 WDR5P61964 334 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 SEMG2Q02383 582 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 CSTF3Q12996 717 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 USP39Q53GS9 565 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 RUNDC3AQ59EK9 446 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 LIPJQ5W064 366 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 MBOAT1Q6ZNC8 495 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 RAVER1Q8IY67 606 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 OFCC1Q8IZS5 231 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 OR52E4Q8NGH9 312 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 ASB11Q8WXH4 323 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 IRF7Q92985 503 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 REPS1Q96D71 796 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 FBXL20Q96IG2 436 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 APOLD1Q96LR9 279 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 ZNF583Q96ND8 569 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 RBM38Q9H0Z9 239 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 POLR1BQ9H9Y6 1135 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 FARSBQ9NSD9 589 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 ATXN10Q9UBB4 475 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 GVINP1Q7Z2Y8 2422 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 WNT9AO14904 365 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 ATG13O75143 517 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 TRPC1P48995 793 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 CCR3P51677 355 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 PTSQ03393 145 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 DCTN2Q13561 401 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 XKR6Q5GH73 641 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 CYP2U1Q7Z449 544 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 TRAM1L1Q8N609 369 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 ZNF548Q8NEK5 533 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 ZNF420Q8TAQ5 688 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 TESCQ96BS2 214 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 OTUB2Q96DC9 234 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 LRIG1Q96JA1 1093 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 SLC46A2Q9BY10 475 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 ACPTQ9BZG2 426 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 CD84Q9UIB8 345 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 MOSPD1Q9UJG1 213 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 CORO2BQ9UQ03 480 aa9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 RUVBL1Q9Y265 456 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-202ENST00000359541 IGLV3-16A0A075B6K0 115 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 UPK3BL1B0FP48 263 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 UPK3BL2E5RIL1 263 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ACOX3O15254 700 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 CREG1O75629 220 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 SNAP29O95721 258 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 C1SP09871 688 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 COX7A2P14406 83 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 PPIBP23284 216 aaKnown RBP9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ITPKAP23677 461 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 HNF4AP41235 474 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ASMTP46597 345 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 CDH15P55291 814 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 DCDC1P59894 354 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 SELPLGQ14242 412 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 RBM48Q5RL73 367 aaKnown RBP9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 C1orf53Q5VUE5 145 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 SPESP1Q6UW49 350 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 RTL10Q7L3V2 364 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 TMC8Q8IU68 726 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 KRTCAP2Q8N6L1 136 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 L3MBTL4Q8NA19 623 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 SETD9Q8NE22 299 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 OR5K1Q8NHB7 308 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 GANCQ8TET4 914 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 REXO5Q96IC2 774 aaKnown RBP9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 PANX1Q96RD7 426 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 OSBPL10Q9BXB5 764 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 TDP1Q9NUW8 608 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 CLEC4EQ9ULY5 219 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 SLC22A14Q9Y267 594 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 CCL27Q9Y4X3 112 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ST14Q9Y5Y6 855 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 TYRP14679 529 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 JUPP14923 745 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ZXDBP98169 803 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ZIK1Q3SY52 487 aaPredicted RBP9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 TMEM26Q6ZUK4 368 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ZCCHC7Q8N3Z6 543 aaKnown RBP9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 BEND7Q8N7W2 519 aaPredicted RBP9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 FBXL8Q96CD0 374 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 THAP11Q96EK4 314 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 METTL2AQ96IZ6 378 aaKnown RBP9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 CXorf21Q9HAI6 301 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 SPHK2Q9NRA0 654 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 ZNF639Q9UID6 485 aa9.06□□□□□ -0.96
GTF3C2-202ENST00000359541 PLOD2O00469 737 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms