RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ZDHHC3Q9NYG2 299 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 OGDHLQ9ULD0 1010 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 CDC14AQ9UNH5 594 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 MRPS23Q9Y3D9 190 aaKnown RBP11.97□□□□□ -0.49
COL20A1-201ENST00000358894 ZNFX1Q9P2E3 1918 aaKnown RBP11.97□□□□□ -0.49
COL20A1-201ENST00000358894 C7orf72A4D263 438 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 WASH4PA8MWX3 477 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 CLDN25C9JDP6 229 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 INPPL1O15357 1258 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 PGLSO95336 258 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TFAP2AP05549 437 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 HNF1BP35680 557 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TLE2Q04725 743 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 CYP2A13Q16696 494 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 USP39Q53GS9 565 aaKnown RBP11.97□□□□□ -0.49
COL20A1-201ENST00000358894 GPR153Q6NV75 609 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 PRR23CQ6ZRP0 262 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TAS1R1Q7RTX1 841 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 CD200R1Q8TD46 325 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 PROX1Q92786 737 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 SCAMP4Q969E2 229 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TRIM45Q9H8W5 580 aaPredicted RBP11.97□□□□□ -0.49
COL20A1-201ENST00000358894 ZNF510Q9Y2H8 683 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 MAP4K5Q9Y4K4 846 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 CLIC1O00299 241 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 ADAM12O43184 909 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 ERN1O75460 977 aaKnown RBP11.97□□□□□ -0.49
COL20A1-201ENST00000358894 LAG3P18627 525 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 PIGFQ07326 219 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 ZNF829Q3KNS6 432 aaPredicted RBP11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TMEM207Q6UWW9 146 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 HACD2Q6Y1H2 254 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
COL20A1-201ENST00000358894 SCML4Q8N228 414 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 NXPE1Q8N323 547 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TBC1D19Q8N5T2 526 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 NLNQ9BYT8 704 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 CD244Q9BZW8 370 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TNFRSF12AQ9NP84 129 aa11.97□□□□□ -0.49
COL20A1-201ENST00000358894 TBX1O43435 398 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 SGTAO43765 313 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 ATG13O75143 517 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 CREG1O75629 220 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 OPN1SWP03999 348 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 FGF4P08620 206 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 SBK3P0C264 359 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 HSD17B1P14061 328 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 IRF5Q13568 498 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 CST9Q5W186 159 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 FRG2Q64ET8 278 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 ANKRD26P1Q6NSI1 321 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 RBM23Q86U06 439 aaKnown RBP11.96□□□□□ -0.49
COL20A1-201ENST00000358894 CYP4Z1Q86W10 505 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 MCFD2Q8NI22 146 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 FRG2BQ96QU4 278 aa11.96□□□□□ -0.49
COL20A1-201ENST00000358894 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.49
COL20A1-201ENST00000358894 H0Y858 1186 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 C8GP07360 202 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 SOX6P35712 828 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 PPM1AP35813 382 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 ALDH3A2P51648 485 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 SLC16A1P53985 500 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TUBA1BP68363 451 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 C2orf80Q0P641 193 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TPGS2Q68CL5 300 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 NADSYN1Q6IA69 706 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TMEM220Q6QAJ8 160 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TUBA1AQ71U36 451 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 APCDD1Q8J025 514 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TTC29Q8NA56 475 aaPredicted RBP11.96□□□□□ -0.5
COL20A1-201ENST00000358894 HTATIP2Q9BUP3 242 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TMEM245Q9H330 911 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 RPF2Q9H7B2 306 aaKnown RBP11.96□□□□□ -0.5
COL20A1-201ENST00000358894 AASDHPPTQ9NRN7 309 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 LTBP1Q14766 1721 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 PER2O15055 1255 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 ACRP10323 421 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 PPP2R1BP30154 601 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 CTNNB1P35222 781 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 HMGCLP35914 325 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 RAB14P61106 215 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 PHKG1Q16816 387 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 SMU1Q2TAY7 513 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 HKDC1Q2TB90 917 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 GTDC1Q4AE62 458 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 FAAH2Q6GMR7 532 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 LCN8Q6JVE9 175 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 CAPN13Q6MZZ7 669 aaPredicted RBP11.96□□□□□ -0.5
COL20A1-201ENST00000358894 CASP12Q6UXS9 341 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 RD3Q7Z3Z2 195 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TSPAN33Q86UF1 283 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TRIM69Q86WT6 500 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 ANKFN1Q8N957 763 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 OR5K1Q8NHB7 308 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TSPEARQ8WU66 669 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 CYB5D2Q8WUJ1 264 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 FAR1Q8WVX9 515 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 MYRFLQ96LU7 910 aa11.96□□□□□ -0.5
COL20A1-201ENST00000358894 TCF25Q9BQ70 676 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms