RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CEP170BQ9Y4F5 1589 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PPEF2O14830 753 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 APOFQ13790 326 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 TTLL6Q8N841 843 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MUL1Q969V5 352 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF597Q96LX8 424 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SEMA3CQ99985 751 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PORCNQ9H237 461 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 IPPKQ9H8X2 491 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MNDAP41218 407 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ERVK-25P63136 954 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 DBPQ10586 325 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GK2Q14410 553 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 FGFBP1Q14512 234 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 POU4F3Q15319 338 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GPAT3Q53EU6 434 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 KLHL22Q53GT1 634 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GLB1L3Q8NCI6 653 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 BSNDQ8WZ55 320 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ARL5BQ96KC2 179 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 NEDD4LQ96PU5 975 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SIAEQ9HAT2 523 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PADI2Q9Y2J8 665 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SDHDO14521 159 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RPP40O75818 363 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 NUDT6P53370 316 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 KCNAB2Q13303 367 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GNA13Q14344 377 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 KIAA1161Q6NSJ0 714 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 OR10H4Q8NGA5 316 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 OR5T2Q8NGG2 359 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM80Q96HE8 168 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SERPINB11Q96P15 392 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 NLNQ9BYT8 704 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 NAA50Q9GZZ1 169 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MMP28Q9H239 520 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CDH7Q9ULB5 785 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF557Q8N988 423 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 TSEN15Q8WW01 171 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MFSD3Q96ES6 412 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 P2RY11Q96G91 374 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF334Q9HCZ1 680 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PRMT8Q9NR22 394 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PCDHA2Q9Y5H9 948 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ANKRD26Q9UPS8 1709 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZC3H13Q5T200 1668 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CAPN15O75808 1086 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 NUDT1P36639 197 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 BAIAP2L2Q6UXY1 529 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 C12orf45Q8N5I9 185 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GEMIN6Q8WXD5 167 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM94Q12767 1356 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CHP2O43745 196 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PSMA6P60900 246 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RNF44Q7L0R7 432 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 JAZF1Q86VZ6 243 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ATP13A1Q9HD20 1204 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PTTG3PQ9NZH4 202 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MGAT4AQ9UM21 535 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MROH1Q8NDA8 1641 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NFAT5O94916 1531 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 SULT1B1O43704 296 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 SLC28A2O43868 658 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 POU2F1P14859 743 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TAS2R41P59536 307 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 UFM1P61960 85 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TAF13Q15543 124 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 CYBRD1Q53TN4 286 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ENPP6Q6UWR7 440 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 BHLHE41Q9C0J9 482 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 RNF121Q9H920 327 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 BRD7Q9NPI1 651 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF358Q9NW07 568 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 C10orf71Q711Q0 1435 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NUPL2O15504 423 aaKnown RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NARSO43776 548 aaKnown RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 LDOC1O95751 146 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PTGR1Q14914 329 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 MPP7Q5T2T1 576 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 SMIM5Q71RC9 77 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DUSP16Q9BY84 665 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 TRIM2Q9C040 744 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 DNAJC27Q9NZQ0 273 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF70Q9UC06 446 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 SMCHD1A6NHR9 2005 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 A0A1W2PQ09 198 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 MEN1O00255 615 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NME6O75414 186 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NMBRP28336 390 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF648Q5T619 568 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 NCEH1Q6PIU2 408 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 LHFPL3Q86UP9 236 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ANKRD46Q86W74 232 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 RNF130Q86XS8 419 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 SNX29P2Q8IUI4 249 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 VGLL2Q8N8G2 317 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 FBXO32Q969P5 355 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF436Q9C0F3 470 aaPredicted RBP5.94□□□□□ -1.46
VPS13B-203ENST00000358544 RGCCQ9H4X1 137 aa5.94□□□□□ -1.46
VPS13B-203ENST00000358544 PXMP2Q9NR77 195 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms