RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 NR4A1P22736 598 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 FMO1Q01740 532 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TMEM225Q6GV28 225 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 AKAP14Q86UN6 197 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 MMAAQ8IVH4 418 aaKnown RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 ELMOD2Q8IZ81 293 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TMEM86AQ8N2M4 240 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 MREGQ8N565 214 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TMEM41AQ96HV5 264 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 OR2AG1Q9H205 316 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 FAM83DQ9H4H8 585 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 RRN3Q9NYV6 651 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 GNG8Q9UK08 70 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 NAALADL1Q9UQQ1 740 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TESMINQ9Y4I5 508 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 AP2A1O95782 977 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 PTPN2P17706 415 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TSFMP43897 325 aaKnown RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 DGKGP49619 791 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 RRP1BQ14684 758 aaKnown RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 SLX4IPQ5VYV7 408 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 RGMBQ6NW40 437 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 MED27Q6P2C8 311 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ANKRD23Q86SG2 305 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 C4orf19Q8IY42 314 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ZNF398Q8TD17 642 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 CYP2S1Q96SQ9 504 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 MRPL45Q9BRJ2 306 aaKnown RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 BCO2Q9BYV7 579 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 FKRPQ9H9S5 495 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ETNK2Q9NVF9 386 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 DAPL1A0PJW8 107 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 CDC7O00311 574 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 YY2O15391 372 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 NME6O75414 186 aaPredicted RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 TRUB2O95900 331 aaKnown RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 PRNPP04156 253 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 C3orf38Q5JPI3 329 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 GARNL3Q5VVW2 1013 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 UNC5AQ6ZN44 842 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ANKRD7Q92527 254 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 SLC35G5Q96KT7 338 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 MBOAT7Q96N66 472 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 MUC13Q9H3R2 512 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 GOLGA2P5Q9HBQ8 144 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 THAP1Q9NVV9 213 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TUBA8Q9NY65 449 aaPredicted RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 NUFIP1Q9UHK0 495 aaKnown RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 B3GALT1Q9Y5Z6 326 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 SETBP1Q9Y6X0 1596 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 FXYD6-FXYD2A0A087WZ82 144 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 PAPSS1O43252 624 aaPredicted RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 ATP6V1G2O95670 118 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 GSTT2BP0CG30 244 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ID2Q02363 134 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ZNF718Q3SXZ3 478 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 TTMPQ5BVD1 217 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 MTX3Q5HYI7 312 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 NAPRTQ6XQN6 538 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ASB18Q6ZVZ8 466 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 CROCCP3Q8IVE0 287 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 C10orf107Q8IVU9 208 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ARL14EPQ8N8R7 260 aaPredicted RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 OR5J2Q8NH18 312 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 IL31RAQ8NI17 732 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 KCTD13Q8WZ19 329 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 BAP1Q92560 729 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 FXYD6Q9H0Q3 95 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 CORO1CQ9ULV4 474 aaPredicted RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 ANGPTL1O95841 491 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 PSKH1P11801 424 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 GNG2P59768 71 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 SLC3A1Q07837 685 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 IQCCQ4KMZ1 466 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 FAM182AQ5T1J6 154 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 GPR142Q7Z601 462 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 OR4D6Q8NGJ1 314 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 PXYLP1Q8TE99 480 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 MAFIPQ8WZ33 124 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 CMKLR1Q99788 373 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 EBNA1BP2Q99848 306 aaKnown RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 RIOX1Q9H6W3 641 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 POFUT2Q9Y2G5 429 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 A0A1B0GVC2 190 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 SOX1O00570 391 aaPredicted RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 B4GAT1O43505 415 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 NAGLUP54802 743 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 RNF4P78317 190 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 SLCO6A1Q86UG4 719 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 DNERQ8NFT8 737 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ACTL9Q8TC94 416 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 RCN3Q96D15 328 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 ERGIC2Q96RQ1 377 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 KAT8Q9H7Z6 458 aaKnown RBP9.57□□□□□ -0.88
CHD3-202ENST00000358181 PXDNLA1KZ92 1463 aa9.57□□□□□ -0.88
CHD3-202ENST00000358181 H3BQF6 201 aa9.56□□□□□ -0.88
CHD3-202ENST00000358181 ANXA4P09525 319 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 MSX2P35548 267 aaPredicted RBP9.56□□□□□ -0.88
CHD3-202ENST00000358181 ETV5P41161 510 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms