RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 PRPS1L1P21108 318 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 SLC44A4Q53GD3 710 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 PITRM1Q5JRX3 1037 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 MREGQ8N565 214 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 C16orf70Q9BSU1 422 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 CCDC28BQ9BUN5 200 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 LRCH1Q9Y2L9 728 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 HS3ST4Q9Y661 456 aa11.03□□□□□ -0.64
FN1-204ENST00000356005 ICE1Q9Y2F5 2266 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 JUNDP17535 347 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 GMFBP60983 142 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 SLBPQ14493 270 aaKnown RBP eCLIP11.02□□□□□ -0.64
FN1-204ENST00000356005 NEDD8Q15843 81 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 CCDC92Q53HC0 331 aaPredicted RBP11.02□□□□□ -0.64
FN1-204ENST00000356005 LRRC66Q68CR7 880 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 LINC00471Q8N535 108 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 ADAMTS18Q8TE60 1221 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 MSANTD3Q96H12 275 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 KLHL31Q9H511 634 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 ERVK-5Q9HDB9 667 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 DTLQ9NZJ0 730 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 FTSJ1Q9UET6 329 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 LINC00854A0A1B0GVQ3 168 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 HCN1O60741 890 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 CYP17A1P05093 508 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 AHCYP23526 432 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 ATXN1P54253 815 aaKnown RBP11.02□□□□□ -0.64
FN1-204ENST00000356005 BTN3A2P78410 334 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 CHRNA6Q15825 494 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 METTL21CQ5VZV1 264 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 DEFB119Q8N690 84 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 OR7A2PQ8NGA2 310 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 TFAP2BQ92481 460 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 HERPUD2Q9BSE4 406 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 ASPNQ9BXN1 380 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 DMAC2Q9NW81 257 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 FETUBQ9UGM5 382 aa11.02□□□□□ -0.64
FN1-204ENST00000356005 A8MUI8 341 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 CTSAP10619 480 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 UGT1A4P22310 534 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 HSD11B1P28845 292 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 UGT1A3P35503 534 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 SPESP1Q6UW49 350 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 PYROXD2Q8N2H3 581 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 NXPE1Q8N323 547 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 WDR60Q8WVS4 1066 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 TRAPPC9Q96Q05 1148 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 FARSBQ9NSD9 589 aaKnown RBP11.02□□□□□ -0.65
FN1-204ENST00000356005 SNX10Q9Y5X0 201 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 SOCS7O14512 581 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 HLA-DQB2P05538 268 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 ANPEPP15144 967 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 RNF148Q8N7C7 305 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 VANGL1Q8TAA9 524 aaPredicted RBP11.02□□□□□ -0.65
FN1-204ENST00000356005 PHF24Q9UPV7 400 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 KPNA4O00629 521 aaPredicted RBP11.02□□□□□ -0.65
FN1-204ENST00000356005 PDE5AO76074 875 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 FABP3P05413 133 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 FAM153BP0C7A2 387 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 ACVR2AP27037 513 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 OSBPL11Q9BXB4 747 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 ING3Q9NXR8 418 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 HEMK1Q9Y5R4 338 aaPredicted RBP11.02□□□□□ -0.65
FN1-204ENST00000356005 SNED1Q8TER0 1413 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 CDC7O00311 574 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 TULP3O75386 442 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 TCEA1P23193 301 aaKnown RBP11.02□□□□□ -0.65
FN1-204ENST00000356005 DNAJB1P25685 340 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 RABGGTBP53611 331 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 DMWDQ09019 674 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 INCA1Q0VD86 236 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 LYSMD3Q7Z3D4 306 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 CNTD1Q8N815 330 aa11.02□□□□□ -0.65
FN1-204ENST00000356005 NOL6Q9H6R4 1146 aaKnown RBP11.02□□□□□ -0.65
FN1-204ENST00000356005 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.65
FN1-204ENST00000356005 NME6O75414 186 aaPredicted RBP11.01□□□□□ -0.65
FN1-204ENST00000356005 CORO7P57737 925 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 CBX3Q13185 183 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.01□□□□□ -0.65
FN1-204ENST00000356005 FSTL4Q6MZW2 842 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 CMC1Q7Z7K0 106 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 OR5L2Q8NGL0 311 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 DAZLQ92904 295 aaKnown RBP11.01□□□□□ -0.65
FN1-204ENST00000356005 GP1BBP13224 206 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 SEPHS1P49903 392 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 PRRT3Q5FWE3 981 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 NAIF1Q69YI7 327 aaPredicted RBP11.01□□□□□ -0.65
FN1-204ENST00000356005 CLHC1Q8NHS4 586 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 MOAP1Q96BY2 351 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 CHMP1AQ9HD42 196 aaPredicted RBP11.01□□□□□ -0.65
FN1-204ENST00000356005 HRASLS2Q9NWW9 162 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 SATB2Q9UPW6 733 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.01□□□□□ -0.65
FN1-204ENST00000356005 TEX46H3BTG2 121 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 COCHO43405 550 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 ERI3O43414 337 aaKnown RBP11.01□□□□□ -0.65
FN1-204ENST00000356005 FBLP22087 321 aaKnown RBP11.01□□□□□ -0.65
FN1-204ENST00000356005 CTSKP43235 329 aa11.01□□□□□ -0.65
FN1-204ENST00000356005 CCR10P46092 362 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms