RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 POP4O95707 220 aaKnown RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 PRLP01236 227 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 GLI4P10075 376 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 POLR2EP19388 210 aaKnown RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 LPOP22079 712 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 NMBRP28336 390 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 SLC8A1P32418 973 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 CD70P32970 193 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 DRD3P35462 400 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 PPARGP37231 505 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 MC3RP41968 323 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 CD151P48509 253 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 SCNN1BP51168 640 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 PDX1P52945 283 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 GYS2P54840 703 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 NAA20P61599 178 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 POLR2LP62875 67 aaKnown RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 PRAMEP78395 509 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 CRADDP78560 199 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 ECT2LQ008S8 904 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 MTM1Q13496 603 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 CNGA3Q16281 694 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 HSP90AA5PQ58FG0 334 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 C9orf64Q5T6V5 341 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 GKAP1Q5VSY0 366 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF470Q6ECI4 717 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 BRAT1Q6PJG6 821 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 CERS6Q6ZMG9 384 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 RBM44Q6ZP01 1051 aaKnown RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 MICALCLQ6ZW33 695 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 STRA8Q7Z7C7 330 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 TRIM69Q86WT6 500 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 HOMEZQ8IX15 550 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 STK40Q8N2I9 435 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 CBARPQ8N350 705 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 ADCY4Q8NFM4 1077 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 WDR36Q8NI36 951 aaKnown RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF398Q8TD17 642 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 SREK1Q8WXA9 508 aaKnown RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 STON2Q8WXE9 905 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 PTPRN2Q92932 1015 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 FAM131CQ96AQ9 280 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 MRGPRX3Q96LB0 322 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 MCCC1Q96RQ3 725 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-201ENST00000355766 APOL2Q9BQE5 337 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 FAM107BQ9H098 131 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 SLC25A18Q9H1K4 315 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 KCNK9Q9NPC2 374 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 DKK3Q9UBP4 350 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 PLLPQ9Y342 182 aa6.83□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3DA0A087WVF3 549 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3IA0A087WXS9 549 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3EA0A087X179 549 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 A0A087X1B8 175 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3KA0A087X1G2 549 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 CCDC187A0A096LP49 1063 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 A0A0J9YYE9 177 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 EDDM13A0A1B0GTR0 161 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3FA6NER0 549 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3LB9A6J9 549 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 F5H423 210 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-201ENST00000355766 PRAMEF26H0Y7S4 382 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TPP1O14773 563 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 AURKAO14965 403 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 PLRG1O43660 514 aaKnown RBP6.82□□□□□ -1.32
VPS13A-201ENST00000355766 VAPBO95292 243 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TGDSO95455 350 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TRBC1P01850 177 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3HP0C7X1 549 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 THEGLP0DJG4 465 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 ERVK-10P10266 1014 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 SRCP12931 536 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF30P17039 623 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 C5AR1P21730 350 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 GRK2P25098 689 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TYK2P29597 1187 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 MAT2AP31153 395 aaKnown RBP6.82□□□□□ -1.32
VPS13A-201ENST00000355766 RPA3P35244 121 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-201ENST00000355766 SERPINB5P36952 375 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 SLC1A2P43004 574 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 RECQLP46063 649 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-201ENST00000355766 RGRP47804 291 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TTPAP49638 278 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 STC1P52823 247 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 BCL2L1Q07817 233 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 ASPHQ12797 758 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TRAF2Q12933 501 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 SRSF6Q13247 344 aaKnown RBP6.82□□□□□ -1.32
VPS13A-201ENST00000355766 IHHQ14623 411 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 ITIH4Q14624 930 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBR1Q16650 682 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 SETMARQ53H47 684 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-201ENST00000355766 SPDYAQ5MJ70 313 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 HHATQ5VTY9 493 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 LYPLAL1Q5VWZ2 237 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3GQ6DHY5 549 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 HIST2H2BCQ6DN03 193 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 TBC1D3CQ6IPX1 549 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 GUSBP11Q6P575 273 aa6.82□□□□□ -1.32
VPS13A-201ENST00000355766 LIPIQ6XZB0 460 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms