RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 KRT6CP48668 564 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 CLK1P49759 484 aaKnown RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 CCL15Q16663 113 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 DDR2Q16832 855 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 SPRYD7Q5W111 196 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 SUSD1Q6UWL2 747 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 CCDC81Q6ZN84 652 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 CEP68Q76N32 757 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 GALNT5Q7Z7M9 940 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 SNX29P2Q8IUI4 249 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 PHACTR4Q8IZ21 702 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 RGL4Q8IZJ4 473 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 BEND7Q8N7W2 519 aaPredicted RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 LPCAT1Q8NF37 534 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 HASPINQ8TF76 798 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 MYDGFQ969H8 173 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 FBXO32Q969P5 355 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 PARK7Q99497 189 aaKnown RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 GABARAPL3Q9BY60 117 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 ELOVL2Q9NXB9 296 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 AGO1Q9UL18 857 aaKnown RBP11.14□□□□□ -0.63
CAPN9-202ENST00000354537 RAI2Q9Y5P3 530 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 U3KQV3 271 aa11.14□□□□□ -0.63
CAPN9-202ENST00000354537 ILVBLA1L0T0 632 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 EVPLLA8MZ36 301 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 AIREO43918 545 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 RGRP47804 291 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 HSPA7P48741 367 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 BEX3Q00994 111 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 CACNB2Q08289 660 aaPredicted RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 PPP1R8Q12972 351 aaKnown RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 GTDC1Q4AE62 458 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 LYPLAL1Q5VWZ2 237 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 TAS2R42Q7RTR8 314 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 KRTCAP2Q8N6L1 136 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 KBTBD8Q8NFY9 601 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 HRASLS5Q96KN8 279 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 RAD9AQ99638 391 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 ZBED2Q9BTP6 218 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 SPATA9Q9BWV2 254 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 NSUN3Q9H649 340 aaKnown RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 KRT84Q9NSB2 600 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 MKLN1Q9UL63 735 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 PNMA8CA0A1B0GUJ8 204 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 HAT1O14929 419 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 MAN1A2O60476 641 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 WBP4O75554 376 aaKnown RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 ITGB1P05556 798 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 OR4Q2P0C623 313 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 ZDHHC11BP0C7U3 371 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 EPB42P16452 691 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 ALDH4A1P30038 563 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 KRT20P35900 424 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 CTSKP43235 329 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 ITGA1P56199 1179 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 NPRL3Q12980 569 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 DGCR6Q14129 220 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 C18orf21Q32NC0 220 aaPredicted RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 LRIT3Q3SXY7 679 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 GGTA1PQ4G0N0 100 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 CBLL1Q75N03 491 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 EIF3MQ7L2H7 374 aaKnown RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 SERINC5Q86VE9 423 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 MIB1Q86YT6 1006 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 MMAAQ8IVH4 418 aaKnown RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 PROX1Q92786 737 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 CDK5RAP1Q96SZ6 601 aaKnown RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 HBEGFQ99075 208 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 EPYCQ99645 322 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 SARS2Q9NP81 518 aaKnown RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 AASDHPPTQ9NRN7 309 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 FKBP14Q9NWM8 211 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 PDP1Q9P0J1 537 aaPredicted RBP11.13□□□□□ -0.63
CAPN9-202ENST00000354537 IL17CQ9P0M4 197 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 PADI3Q9ULW8 664 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 RNF6Q9Y252 685 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 PEX16Q9Y5Y5 336 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 BPTFQ12830 3046 aa11.13□□□□□ -0.63
CAPN9-202ENST00000354537 CHD5Q8TDI0 1954 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 A0A0D9SEW6 157 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 ACSL4O60488 711 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 PRMT3O60678 531 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 CLDN11O75508 207 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 TBX18O95935 607 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 DEFA1P59665 94 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 DEFA3P59666 94 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 RPP38P78345 283 aaKnown RBP11.12□□□□□ -0.63
CAPN9-202ENST00000354537 GTF2H3Q13889 308 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 VMACQ2NL98 169 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 STEAP3Q658P3 488 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 PTRHD1Q6GMV3 140 aaKnown RBP11.12□□□□□ -0.63
CAPN9-202ENST00000354537 SLC46A3Q7Z3Q1 461 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 HORMAD1Q86X24 394 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 POC5Q8NA72 575 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 BRI3BPQ8WY22 251 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 MYEOVQ96EZ4 313 aa11.12□□□□□ -0.63
CAPN9-202ENST00000354537 ZNF486Q96H40 463 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms