RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 STX1BP61266 288 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CSNK2A1P68400 391 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ELP6Q0PNE2 266 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ZKSCAN8Q15776 578 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 DUSP6Q16828 381 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 HS1BP3Q53T59 392 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SPOUT1Q5T280 376 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GRTP1Q5TC63 336 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 KCTD11Q693B1 232 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FAM166AQ6J272 317 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 HEPHL1Q6MZM0 1159 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 RGMBQ6NW40 437 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 METTL2BQ6P1Q9 378 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 PLXDC2Q6UX71 529 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 DEF8Q6ZN54 512 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 RGS9BPQ6ZS82 235 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FAM57BQ71RH2 274 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 AMZ2Q86W34 360 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TMC8Q8IU68 726 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CNGA4Q8IV77 575 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 Q8N1X5 172 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 GBGT1Q8N5D6 347 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 AADATQ8N5Z0 425 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 BMPERQ8N8U9 685 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 CSNK2A3Q8NEV1 391 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM174Q8WUU8 243 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 RAB7BQ96AH8 199 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ESAMQ96AP7 390 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 METTL2AQ96IZ6 378 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 VPS33BQ9H267 617 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 RPF1Q9H9Y2 349 aaKnown RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FANCFQ9NPI8 374 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 SMPD4Q9NXE4 827 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 DCAF16Q9NXF7 216 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 AATFQ9NY61 560 aaKnown RBP eCLIP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 DAPK2Q9UIK4 370 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FBXL2Q9UKC9 423 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TTC7AQ9ULT0 858 aaPredicted RBP1.57□□□□□ -2.16
BRCA1-202ENST00000354071 TNNQ9UQP3 1299 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 FHOD3Q2V2M9 1422 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 MAP3K1Q13233 1512 aa1.57□□□□□ -2.16
BRCA1-202ENST00000354071 ABCA5Q8WWZ7 1642 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 A0A087WV48 116 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 C17orf102A2RUQ5 167 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF814B7Z6K7 855 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 NARSO43776 548 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 STBD1O95210 358 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 STAG3L1P0CL83 205 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 MYOD1P15172 320 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 KCNA5P22460 613 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HNRNPH2P55795 449 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 UBE2HP62256 183 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 RAPSNQ13702 412 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 DECR1Q16698 335 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SYT14P1Q58G82 188 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 LY6G5CQ5SRR4 150 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 FAM46CQ5VWP2 391 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PLEKHA7Q6IQ23 1121 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SLC16A12Q6ZSM3 486 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 MMD2Q8IY49 270 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SLC5A8Q8N695 610 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ARFGAP1Q8N6T3 406 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TEX45Q8NA69 505 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SLC38A9Q8NBW4 561 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM185AQ8NFB2 350 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SPATA22Q8NHS9 363 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 B4GALNT2Q8NHY0 566 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF606Q8WXB4 792 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SMPDL3BQ92485 455 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CHFRQ96EP1 664 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ERO1AQ96HE7 468 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 LRRC3BQ96PB8 259 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 NTMT1Q9BV86 223 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SIRPDQ9H106 197 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 RWDD1Q9H446 243 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 DPEP3Q9H4B8 488 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 KCNMB3Q9NPA1 279 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PIH1D3Q9NQM4 214 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SPG21Q9NZD8 308 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 FLRT1Q9NZU1 646 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PSORS1C1Q9UIG5 152 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HOOK1Q9UJC3 728 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SNX7Q9UNH6 387 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 GRIP1Q9Y3R0 1128 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SPIN1Q9Y657 262 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PDE4DIPQ5VU43 2346 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 THSD7AQ9UPZ6 1657 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 WDR17Q8IZU2 1322 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 RNF103-CHMP3A0A140T963 221 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 A0A1W2PPW3 197 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 KANSL1LA0AUZ9 987 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 RNF103O00237 685 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PEX11AO75192 247 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 DDHD2O94830 711 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 OR6B1O95007 311 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TRIM16O95361 564 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 BAG3O95817 575 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 AK1P00568 194 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HAPLN1P10915 354 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PDHBP11177 359 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms