RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 PGGT1BP53609 377 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 RPA4Q13156 261 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 EIF4HQ15056 248 aaKnown RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 NADK2Q4G0N4 442 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PAGE3Q5JUK9 113 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 CAPN13Q6MZZ7 669 aaPredicted RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 LILRA6Q6PI73 481 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 DLEU7Q6UYE1 221 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 Q6ZSR9 355 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 CAMKMTQ7Z624 323 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 THAP5Q7Z6K1 395 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 ZSWIM9Q86XI8 627 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 ZC3H7AQ8IWR0 971 aaKnown RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 CPA6Q8N4T0 437 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 FAM156AQ8NDB6 213 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 SETD7Q8WTS6 366 aaKnown RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 FIG4Q92562 907 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 TCF25Q9BQ70 676 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 LBHD1Q9BQE6 289 aaPredicted RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 CHID1Q9BWS9 393 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 GRIP2Q9C0E4 1043 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 NSUN3Q9H649 340 aaKnown RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 TM9SF3Q9HD45 589 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PRM3Q9NNZ6 103 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 TDP1Q9NUW8 608 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PDE10AQ9Y233 779 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 ACTL7AQ9Y615 435 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PRSS21Q9Y6M0 314 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 ASPDHA6ND91 283 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 LOC730098B7Z3J9 87 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 H0YIV9 168 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 ANKRD28O15084 1053 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 HOXC11O43248 304 aaPredicted RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 VEGFDO43915 354 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 KCNJ13O60928 360 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 CSPG5O95196 566 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 MT-CO1P00395 513 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 CST1P01037 141 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PDYNP01213 254 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 FGBP02675 491 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 JUNBP17275 347 aaPredicted RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 HRH2P25021 359 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 KIR3DL1P43629 444 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 HLCSP50747 726 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 ATN1P54259 1190 aaPredicted RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 VEZF1Q14119 521 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PDGFRLQ15198 375 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 DGKKQ5KSL6 1271 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 CPZQ66K79 652 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 MED27Q6P2C8 311 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 SHQ1Q6PI26 577 aaKnown RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 ZNF773Q6PK81 442 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 AMIGO2Q86SJ2 522 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 HORMAD1Q86X24 394 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 TBC1D19Q8N5T2 526 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 GPR26Q8NDV2 337 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 OR52B6Q8NGF0 335 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 SP7Q8TDD2 431 aaPredicted RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 SNX19Q92543 992 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PYURFQ96I23 114 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 ZNF347Q96SE7 839 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 CPPED1Q9BRF8 314 aaPredicted RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 ANKHQ9HCJ1 492 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 TLR9Q9NR96 1032 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 THUMPD1Q9NXG2 353 aaKnown RBP3.63□□□□□ -1.83
RNF38-203ENST00000353739 UBAP1Q9NZ09 502 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 SPATA7Q9P0W8 599 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 ATXN10Q9UBB4 475 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 B4GALT6Q9UBX8 382 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PPT2Q9UMR5 302 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 RNF11Q9Y3C5 154 aa3.63□□□□□ -1.83
RNF38-203ENST00000353739 PLXNA2O75051 1894 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 C17orf113A0A1B0GUU1 675 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 A0A1W2PRU2 124 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 FOXE1O00358 373 aaPredicted RBP3.62□□□□□ -1.83
RNF38-203ENST00000353739 RFXANKO14593 260 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 CCL16O15467 120 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 E2F6O75461 281 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 KRT75O95678 551 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 FABP3P05413 133 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 ELFN1P0C7U0 828 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 ADH5P11766 374 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 COX7A2P14406 83 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 TYRP14679 529 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 AMD1P17707 334 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 ITGB6P18564 788 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 GSTM2P28161 218 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 MAGEA8P43361 318 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 DGKGP49619 791 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 VEGFBP49765 207 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 ERFP50548 548 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 ANXA11P50995 505 aaKnown RBP3.62□□□□□ -1.83
RNF38-203ENST00000353739 ATXN3P54252 364 aaPredicted RBP3.62□□□□□ -1.83
RNF38-203ENST00000353739 TMBIM6P55061 237 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 IRF8Q02556 426 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 PTSQ03393 145 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.62□□□□□ -1.83
RNF38-203ENST00000353739 RBBP4Q09028 425 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 FCHO2Q0JRZ9 810 aa3.62□□□□□ -1.83
RNF38-203ENST00000353739 SFSWAPQ12872 951 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms