RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 LRRC8DQ7L1W4 858 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 VRK3Q8IV63 474 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 ARL14EPQ8N8R7 260 aaPredicted RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 MCOLN3Q8TDD5 553 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 FAR1Q8WVX9 515 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 SH3YL1Q96HL8 342 aaPredicted RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 APOLD1Q96LR9 279 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 DPH2Q9BQC3 489 aaPredicted RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 CLSTN3Q9BQT9 956 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 NMRK2Q9NPI5 230 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 SH3GLB1Q9Y371 365 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 NPIPB15A6NHN6 443 aaPredicted RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 CBFA2T3O75081 653 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 NDUFS2O75306 463 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 SH3BGRLO75368 114 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 RETP07949 1114 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 RPS3P23396 243 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 TUFMP49411 452 aaKnown RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 BCL2L1Q07817 233 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 MAD2L1Q13257 205 aaPredicted RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 ATG9BQ674R7 924 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 TXNDC8Q6A555 127 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 CCDC81Q6ZN84 652 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 NDNFQ8TB73 568 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 ADAMTS19Q8TE59 1207 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 RDH12Q96NR8 316 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 SH3GL1Q99961 368 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 PRDM8Q9NQV8 689 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 ERGIC3Q9Y282 383 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 SDC1P18827 310 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 CLK3P49761 638 aaKnown RBP17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 B4GALNT1Q00973 533 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 SLC8B1Q6J4K2 584 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 ZCCHC8Q6NZY4 707 aaKnown RBP17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 B3GNT8Q7Z7M8 397 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 TRPS1Q9UHF7 1281 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 ENPP5Q9UJA9 477 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 CA12O43570 354 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 MTX2O75431 263 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 ANGPTL1O95841 491 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 ITPKAP23677 461 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 IGFBP5P24593 272 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 CLDN8P56748 225 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 VBP1P61758 197 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 ADPRMQ3LIE5 342 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 DGKKQ5KSL6 1271 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 NEK5Q6P3R8 708 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 TMEM150AQ86TG1 271 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 OR7A2PQ8NGA2 310 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 ZFP90Q8TF47 636 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 CHPT1Q8WUD6 406 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 KCNH6Q9H252 994 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 TRNAU1APQ9NX07 287 aaKnown RBP17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 FAM8A1Q9UBU6 413 aa17.62■□□□□ 0.41
PTP4A3-202ENST00000349124 BCAP31P51572 246 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 SMARCB1Q12824 385 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 CBX3Q13185 183 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 NPTX1Q15818 432 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 ATP13A5Q4VNC0 1218 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 NXPE1Q8N323 547 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 PPP1R14BQ96C90 147 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 NEURL2Q9BR09 285 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 ATG10Q9H0Y0 220 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 RASSF1Q9NS23 344 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 TRBV5-4A0A0C4DH59 114 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 ZNF99A8MXY4 864 aaPredicted RBP17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 FAM220BPB1ANY3 271 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 RFXANKO14593 260 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 ERN1O75460 977 aaKnown RBP17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 IMPDH2P12268 514 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 IFITM3Q01628 133 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 MACC1Q6ZN28 852 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 TPGS1Q6ZTW0 290 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 MAGED4Q96JG8 741 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 ELOVL6Q9H5J4 265 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 AASDHPPTQ9NRN7 309 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 DNMT3BQ9UBC3 853 aaKnown RBP17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 BLOC1S6Q9UL45 172 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 SLC22A14Q9Y267 594 aa17.61■□□□□ 0.41
PTP4A3-202ENST00000349124 FRMPD3Q5JV73 1810 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 A0A096LPI6 279 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 SOBPA7XYQ1 873 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 YY2O15391 372 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 SLC16A6O15403 523 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 UGT2B11O75310 529 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 ZNF821O75541 412 aaPredicted RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 KRT6AP02538 564 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 KRT6BP04259 564 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 ANXA5P08758 320 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 SLC10A3P09131 477 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 CTSOP43234 321 aaPredicted RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 KRT6CP48668 564 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 CD97P48960 835 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 STK19P49842 368 aaPredicted RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 VLDLRP98155 873 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 RGS21Q2M5E4 152 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 PTCHD3Q3KNS1 767 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 LRIF1Q5T3J3 769 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 TMEM236Q5W0B7 351 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 KIAA1841Q6NSI8 718 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms