RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 STAG3L4Q8TBR4 150 aa18.21■□□□□ 0.51
SCARF1-202ENST00000348987 SLC39A13Q96H72 371 aa18.21■□□□□ 0.51
SCARF1-202ENST00000348987 Q96MT0 163 aa18.21■□□□□ 0.51
SCARF1-202ENST00000348987 APOL4Q9BPW4 351 aa18.21■□□□□ 0.51
SCARF1-202ENST00000348987 TRIM62Q9BVG3 475 aa18.21■□□□□ 0.51
SCARF1-202ENST00000348987 SP110Q9HB58 689 aa18.21■□□□□ 0.51
SCARF1-202ENST00000348987 FAM50BQ9Y247 325 aa18.21■□□□□ 0.51
SCARF1-202ENST00000348987 BTBD3Q9Y2F9 522 aa18.21■□□□□ 0.51
SCARF1-202ENST00000348987 KRT87PA6NCN2 255 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 GRXCR2A6NFK2 248 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 H3BQ06 376 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-202ENST00000348987 CDC7O00311 574 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 KERAO60938 352 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 ZNF623O75123 536 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 SLC2A3P11169 496 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 SLC15A1P46059 708 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 GPR50Q13585 617 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 GTF2H3Q13889 308 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 SPANXN2Q5MJ10 180 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 SPERTQ8NA61 448 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 OR13C4Q8NGS5 318 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 BLOC1S5Q8TDH9 187 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 SUSD3Q96L08 255 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 SERPINB11Q96P15 392 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 PRDM5Q9NQX1 630 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-202ENST00000348987 MKLN1Q9UL63 735 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 TBC1D24Q9ULP9 559 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 Q9Y3F1 56 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 ASB1Q9Y576 335 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 CREG1O75629 220 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 MSH3P20585 1137 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 ACVRL1P37023 503 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 GALNT3Q14435 633 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 RAP1GAP2Q684P5 730 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 FBXL22Q6P050 247 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 ZNF517Q6ZMY9 492 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-202ENST00000348987 GCNT7Q6ZNI0 430 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 CCDC71Q8IV32 467 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-202ENST00000348987 TRIM63Q969Q1 353 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 OR51E2Q9H255 320 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 SLA2Q9H6Q3 261 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 A3GALT2U3KPV4 340 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 PTPRDP23468 1912 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 NLRC5Q86WI3 1866 aa18.2■□□□□ 0.5
SCARF1-202ENST00000348987 MYO1GB0I1T2 1018 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SERPINF2P08697 491 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 HTR7P34969 479 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 TBX4P57082 545 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 STARD3Q14849 445 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 TIGD6Q17RP2 521 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SHQ1Q6PI26 577 aaKnown RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 PAQR3Q6TCH7 311 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 OR8H2Q8N162 312 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 KIAA1191Q96A73 305 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 PHOX2BQ99453 314 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 ZYG11BQ9C0D3 744 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 PCTPQ9UKL6 214 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 TLR6Q9Y2C9 796 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 POLR3HQ9Y535 204 aaPredicted RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 TRPM7Q96QT4 1865 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 LOC110117498-PIK3R3F6TDL0 507 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 CAPN5O15484 640 aaPredicted RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 DUSP11O75319 330 aaKnown RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 WBP4O75554 376 aaKnown RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SCELO95171 688 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 CREMQ03060 361 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 TYSND1Q2T9J0 566 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 GTDC1Q4AE62 458 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 OR52B6Q8NGF0 335 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 C1orf74Q96LT6 269 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 CENPOQ9BU64 300 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 ZFP14Q9HCL3 533 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 AMBNQ9NP70 447 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SLC25A37Q9NYZ2 338 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 PEX16Q9Y5Y5 336 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 HSPE1-MOB4S4R3N1 261 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 WASH4PA8MWX3 477 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 PCDHGA12O60330 932 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SNX4O95219 450 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 ASGR1P07306 291 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 PRKACBP22694 351 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 FLT3LGP49771 235 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 HTR6P50406 440 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SLAMF1Q13291 335 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 IRF5Q13568 498 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 RFTN2Q52LD8 501 aaPredicted RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 TRAF7Q6Q0C0 670 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 EFL1Q7Z2Z2 1120 aaKnown RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 ATAD1Q8NBU5 361 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 GRPEL2Q8TAA5 225 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 GTF2H4Q92759 462 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 DNASE1L2Q92874 299 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 FYTTD1Q96QD9 318 aaKnown RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SMIM14Q96QK8 99 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SIGLEC11Q96RL6 698 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 SEMA3CQ99985 751 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 GDF15Q99988 308 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 RAPGEFL1Q9UHV5 662 aa18.19■□□□□ 0.5
SCARF1-202ENST00000348987 NDRG4Q9ULP0 352 aaKnown RBP18.19■□□□□ 0.5
SCARF1-202ENST00000348987 A0A0G2JMP0 313 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms