RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ABHD16BQ9H3Z7 469 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 ZNF556Q9HAH1 456 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 PLCXD1Q9NUJ7 323 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 WDR70Q9NW82 654 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 VNN3Q9NY84 501 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 VAPAQ9P0L0 249 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 CFL2Q9Y281 166 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 ARIH1Q9Y4X5 557 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 KLK4Q9Y5K2 254 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 LEUTXA8MZ59 168 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 PDPK1O15530 556 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 CPNE3O75131 537 aaKnown RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 CREG1O75629 220 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 MLYCDO95822 493 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 SNAI1O95863 264 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 DNTTP04053 509 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 SLC2A3P11169 496 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 CYP4B1P13584 511 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 ZNF37AP17032 561 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 SMPD1P17405 629 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 HOXD10P28358 340 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 HOXA9P31269 272 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 NKX3-2P78367 333 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 ARMCX4Q5H9R4 360 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 ARTNQ5T4W7 220 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 KIAA1614Q5VZ46 1190 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 FAM205BPQ63HN1 556 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 IL31Q6EBC2 164 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 SNX20Q7Z614 316 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 SULF1Q8IWU6 871 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 RDH10Q8IZV5 341 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 FBXO39Q8N4B4 442 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 FBXL6Q8N531 539 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 TP53I13Q8NBR0 393 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 STAG3L4Q8TBR4 150 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 APH1BQ8WW43 257 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 MYDGFQ969H8 173 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 KIAA1191Q96A73 305 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 CDCA5Q96FF9 252 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 PYURFQ96I23 114 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 TRNT1Q96Q11 434 aaKnown RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 COPS4Q9BT78 406 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 PDGFDQ9GZP0 370 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 DERL2Q9GZP9 239 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 ACTL8Q9H568 366 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 SEMA4BQ9NPR2 832 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 B3GNT2Q9NY97 397 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 PSORS1C1Q9UIG5 152 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 KLHL21Q9UJP4 597 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 FBXO9Q9UK97 447 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 U3KQV3 271 aa10.08□□□□□ -0.8
CHRNA1-202ENST00000348749 LOC285095A0A1B0GVY8 99 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 FAM220BPB1ANY3 271 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 STX7O15400 261 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 TRIM3O75382 744 aaPredicted RBP10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 GLP2RO95838 553 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 PEX11BO96011 259 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 EPOP01588 193 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 CDK1P06493 297 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 GSTM1P09488 218 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 ODC1P11926 461 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 CD72P21854 359 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 HLA-DMAP28067 261 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 TNFSF8P32971 234 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 PTGS2P35354 604 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 GZMKP49863 264 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 ARHGDIAP52565 204 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 TIAL1Q01085 375 aaKnown RBP eCLIP10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 YWHAHQ04917 246 aaPredicted RBP10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 IRF3Q14653 427 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 KIAA0040Q15053 153 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 DDR2Q16832 855 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 LETMD1Q6P1Q0 360 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 DPY19L3Q6ZPD9 716 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 CCDC71Q8IV32 467 aaPredicted RBP10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 ARRDC4Q8NCT1 418 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 OR6P1Q8NGX9 317 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 SH3RF2Q8TEC5 729 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 DNASE1L2Q92874 299 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 NCLNQ969V3 563 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 MYLPFQ96A32 169 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 OMA1Q96E52 524 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 FCRL2Q96LA5 508 aaPredicted RBP10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 Q96MT0 163 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 CENPOQ9BU64 300 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 SLC22A4Q9H015 551 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 SIK2Q9H0K1 926 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 OR51E2Q9H255 320 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 RETREG1Q9H6L5 497 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 DYRK4Q9NR20 520 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 TMEM30AQ9NV96 361 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 EIF3KQ9UBQ5 218 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 NUFIP1Q9UHK0 495 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 SLC45A1Q9Y2W3 748 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 PCDHB5Q9Y5E4 795 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 PTPRDP23468 1912 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 ANKRD12Q6UB98 2062 aa10.07□□□□□ -0.8
CHRNA1-202ENST00000348749 LOC100506127A0A0U1RQW1 187 aa10.06□□□□□ -0.8
CHRNA1-202ENST00000348749 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms