RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 NTHL1P78549 312 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 ABRAXAS1Q6UWZ7 409 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 LPCAT2Q7L5N7 544 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 CLEC4FQ8N1N0 589 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 LILRA3Q8N6C8 439 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-201ENST00000343916 TNIP2Q8NFZ5 429 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 GAB3Q8WWW8 586 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 NCLNQ969V3 563 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 EBPLQ9BY08 206 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 PCDH12Q9NPG4 1184 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 C8orf4Q9NR00 106 aa18.84■□□□□ 0.61
COL9A3-201ENST00000343916 HELZP42694 1942 aaKnown RBP18.84■□□□□ 0.61
COL9A3-201ENST00000343916 TRBV5-3A0A0A0MS03 114 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 A0A0J9YVX5 310 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 FADS2P1A8MWK0 482 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 GFYI3L273 518 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 PRKD3O94806 890 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 BMP10O95393 424 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 GALK1P51570 392 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 CLDN8P56748 225 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 ZDHHC20Q5W0Z9 365 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 GPR65Q8IYL9 337 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 PAWRQ96IZ0 340 aaKnown RBP18.83■□□□□ 0.61
COL9A3-201ENST00000343916 RIOK2Q9BVS4 552 aaKnown RBP18.83■□□□□ 0.61
COL9A3-201ENST00000343916 LTB4R2Q9NPC1 389 aa18.83■□□□□ 0.61
COL9A3-201ENST00000343916 A0A087WXM4 84 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 CTSLP07711 333 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 CYP2A7P20853 494 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 S100A3P33764 101 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 ADARB1P78563 741 aaKnown RBP18.83■□□□□ 0.6
COL9A3-201ENST00000343916 CHIT1Q13231 466 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 CDKL4Q5MAI5 379 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 CYP2U1Q7Z449 544 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 MCOLN3Q8TDD5 553 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 SLC47A1Q96FL8 570 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 MUS81Q96NY9 551 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 GPRC5BQ9NZH0 403 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 ERVW-1Q9UQF0 538 aa18.83■□□□□ 0.6
COL9A3-201ENST00000343916 EIF3FO00303 357 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-201ENST00000343916 PRSS23O95084 383 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 CST1P01037 141 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 ALBP02768 609 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 ALPLP05186 524 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 RHOP08100 348 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 MYCLP1P12525 358 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-201ENST00000343916 HNMTP50135 292 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 PFN3P60673 137 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 ABRQ12979 859 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 CBX2Q14781 532 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-201ENST00000343916 GGTA1PQ4G0N0 100 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 PLEKHS1Q5SXH7 462 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 ANKRD34AQ69YU3 496 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 BRAT1Q6PJG6 821 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 USP51Q70EK9 711 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 NECAB2Q7Z6G3 386 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 AADATQ8N5Z0 425 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 ZSWIM3Q96MP5 696 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 HEPHQ9BQS7 1158 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 UGT2B28Q9BY64 529 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 DNAJC11Q9NVH1 559 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 CXorf51AA0A1B0GTR3 108 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 B4GAT1O43505 415 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 CD22P20273 847 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 ALDH3A2P51648 485 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 SLC14A1Q13336 389 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 SF1Q15637 639 aaKnown RBP18.82■□□□□ 0.6
COL9A3-201ENST00000343916 FRG2Q64ET8 278 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 ELMSAN1Q6PJG2 1045 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 MICU2Q8IYU8 434 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 TCAIMQ8N3R3 496 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 L3MBTL4Q8NA19 623 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 NETO1Q8TDF5 533 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 FRS2Q8WU20 508 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 FRG2BQ96QU4 278 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 SMURF2Q9HAU4 748 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 TIMMDC1Q9NPL8 285 aa18.82■□□□□ 0.6
COL9A3-201ENST00000343916 NOBOXO60393 691 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 MPC1LP0DKB6 136 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 ELK4P28324 431 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 VIPR1P32241 457 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 CCSMST1Q4G0I0 132 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.81■□□□□ 0.6
COL9A3-201ENST00000343916 OR4F3Q6IEY1 312 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 SH3GL1Q99961 368 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 THEGQ9P2T0 379 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 NOTCH4Q99466 2003 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 TRIM64A6NGJ6 449 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 WASH3PC4AMC7 463 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 G3V2T6 193 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 ZNF30P17039 623 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 AMD1P17707 334 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 POLR2EP19388 210 aaKnown RBP18.81■□□□□ 0.6
COL9A3-201ENST00000343916 PTPN6P29350 595 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 PREPP48147 710 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 CTSCP53634 463 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 EMP3P54852 163 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 CTBSQ01459 385 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 DDX39BQ13838 428 aaKnown RBP18.81■□□□□ 0.6
COL9A3-201ENST00000343916 DAG1Q14118 895 aa18.81■□□□□ 0.6
COL9A3-201ENST00000343916 PON2Q15165 354 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms