RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 GPR26Q8NDV2 337 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 TRUB1Q8WWH5 349 aaKnown RBP23.41■■□□□ 1.34
NELFB-201ENST00000343053 ALOXE3Q9BYJ1 711 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 ELOVL6Q9H5J4 265 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 USE1Q9NZ43 259 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 H7C4K7 107 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 FADS2O95864 444 aaKnown RBP23.41■■□□□ 1.34
NELFB-201ENST00000343053 EBLN1P0CF75 366 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 BCAP31P51572 246 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 FAR1Q8WVX9 515 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 GLMNQ92990 594 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 PYURFQ96I23 114 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 CWH43Q9H720 699 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 RNF186Q9NXI6 227 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 ERGIC3Q9Y282 383 aa23.41■■□□□ 1.34
NELFB-201ENST00000343053 NPIPB15A6NHN6 443 aaPredicted RBP23.4■■□□□ 1.34
NELFB-201ENST00000343053 MTX2O75431 263 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 SULT1C4O75897 302 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 TRBC1P01850 177 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 CD97P48960 835 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 ZCCHC8Q6NZY4 707 aaKnown RBP23.4■■□□□ 1.34
NELFB-201ENST00000343053 B3GNT8Q7Z7M8 397 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 SAPCD2Q86UD0 394 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 GLB1L3Q8NCI6 653 aaPredicted RBP23.4■■□□□ 1.34
NELFB-201ENST00000343053 ZFP90Q8TF47 636 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.342e-9■■■■■ 35.5
NELFB-201ENST00000343053 RDH12Q96NR8 316 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 SH3GL1Q99961 368 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 KLF16Q9BXK1 252 aaPredicted RBP23.4■■□□□ 1.34
NELFB-201ENST00000343053 NMRK2Q9NPI5 230 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 DAPK2Q9UIK4 370 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 SDC1P18827 310 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 PSMB9P28065 219 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 CPZQ66K79 652 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 TMEM132CQ8N3T6 1108 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 USP7Q93009 1102 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 CD84Q9UIB8 345 aa23.4■■□□□ 1.34
NELFB-201ENST00000343053 TMEM247A6NEH6 219 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 ZNF99A8MXY4 864 aaPredicted RBP23.39■■□□□ 1.34
NELFB-201ENST00000343053 FAM220BPB1ANY3 271 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 RFXANKO14593 260 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 WDR47O94967 919 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 DDX39BQ13838 428 aaKnown RBP23.39■■□□□ 1.34
NELFB-201ENST00000343053 BOP1Q14137 746 aaKnown RBP23.39■■□□□ 1.34
NELFB-201ENST00000343053 KIAA1841Q6NSI8 718 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 TPGS1Q6ZTW0 290 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 ARL14EPQ8N8R7 260 aaPredicted RBP23.39■■□□□ 1.34
NELFB-201ENST00000343053 OR7A2PQ8NGA2 310 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 CHPT1Q8WUD6 406 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 SH3YL1Q96HL8 342 aaPredicted RBP23.39■■□□□ 1.34
NELFB-201ENST00000343053 BBS2Q9BXC9 721 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 ATG10Q9H0Y0 220 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 TRPS1Q9UHF7 1281 aa23.39■■□□□ 1.34
NELFB-201ENST00000343053 RETP07949 1114 aa23.39■■□□□ 1.33
NELFB-201ENST00000343053 RXRGP48443 463 aa23.39■■□□□ 1.33
NELFB-201ENST00000343053 GZMMP51124 257 aa23.39■■□□□ 1.33
NELFB-201ENST00000343053 EPS8Q12929 822 aa23.39■■□□□ 1.33
NELFB-201ENST00000343053 RBM12BQ8IXT5 1001 aaKnown RBP23.39■■□□□ 1.33
NELFB-201ENST00000343053 NTMT1Q9BV86 223 aa23.39■■□□□ 1.33
NELFB-201ENST00000343053 MTRRQ9UBK8 725 aa23.39■■□□□ 1.33
NELFB-201ENST00000343053 KRT6AP02538 564 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 KRT6BP04259 564 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 CCR7P32248 378 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 KRT6CP48668 564 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 STK19P49842 368 aaPredicted RBP23.38■■□□□ 1.33
NELFB-201ENST00000343053 DAPP51397 102 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 FOXD4Q12950 439 aaPredicted RBP23.38■■□□□ 1.33
NELFB-201ENST00000343053 MTA1Q13330 715 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 GPNMBQ14956 572 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 TRIM16LQ309B1 348 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 ADPRMQ3LIE5 342 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 TXNDC8Q6A555 127 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 VRK3Q8IV63 474 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 PNMA8BQ9ULN7 279 aaPredicted RBP23.38■■□□□ 1.33
NELFB-201ENST00000343053 SCN8AQ9UQD0 1980 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 ANAPC1Q9H1A4 1944 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 ANXA5P08758 320 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 RPS3P23396 243 aaKnown RBP eCLIP23.38■■□□□ 1.33
NELFB-201ENST00000343053 PTPN6P29350 595 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 CLK3P49761 638 aaKnown RBP23.38■■□□□ 1.33
NELFB-201ENST00000343053 GABARAPL2P60520 117 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 ATG9BQ674R7 924 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 UBE2R2Q712K3 238 aaPredicted RBP23.38■■□□□ 1.33
NELFB-201ENST00000343053 CALHM3Q86XJ0 350 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 NXPE1Q8N323 547 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 RPL3LQ92901 407 aaKnown RBP23.38■■□□□ 1.33
NELFB-201ENST00000343053 PPP1R14BQ96C90 147 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 VN1R3Q9BXE9 311 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 TMEM165Q9HC07 324 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 OR51B4Q9Y5P0 310 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 MYOFQ9NZM1 2061 aa23.38■■□□□ 1.33
NELFB-201ENST00000343053 CPSF4O95639 269 aaKnown RBP23.37■■□□□ 1.33
NELFB-201ENST00000343053 AQP1P29972 269 aa23.37■■□□□ 1.33
NELFB-201ENST00000343053 NCS1P62166 190 aa23.37■■□□□ 1.33
NELFB-201ENST00000343053 KCNH6Q9H252 994 aa23.37■■□□□ 1.33
NELFB-201ENST00000343053 INTS6Q9UL03 887 aaKnown RBP23.37■■□□□ 1.33
NELFB-201ENST00000343053 ZNF451Q9Y4E5 1061 aa23.37■■□□□ 1.33
NELFB-201ENST00000343053 PORP16435 677 aaPredicted RBP23.37■■□□□ 1.33
NELFB-201ENST00000343053 FUT4P22083 530 aa23.37■■□□□ 1.33
NELFB-201ENST00000343053 CDH3P22223 829 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms