RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 HMGCLP35914 325 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 HNMTP50135 292 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 PLA2G16P53816 162 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 RBM48Q5RL73 367 aaKnown RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 OLIG1Q8TAK6 271 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SMOXQ9NWM0 555 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 H0YJX3 145 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CCNB2O95067 398 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CHRM5P08912 532 aaPredicted RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 HSD17B1P14061 328 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 PTPN2P17706 415 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 IL12RB1P42701 662 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 MAGEA3P43357 314 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CCR4P51679 360 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CLCN4P51793 760 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 HSPB3Q12988 150 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SLBPQ14493 270 aaKnown RBP eCLIP7.02□□□□□ -1.29
VCAN-202ENST00000342785 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 OR10G2Q8NGC3 310 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 MRPL48Q96GC5 212 aaKnown RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 GSTO2Q9H4Y5 243 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 MTRRQ9UBK8 725 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 FZD4Q9ULV1 537 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 NCKAP1Q9Y2A7 1128 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 PCDHGA7Q9Y5G6 932 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 HMX2A2RU54 273 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 HAT1O14929 419 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 DYRK3O43781 588 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 GADD45GO95257 159 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 TGFB1P01137 390 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 BCKDHAP12694 445 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ZNF182P17025 639 aaPredicted RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 GABRB3P28472 473 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CSNK2BP67870 215 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 TAB1Q15750 504 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 HKDC1Q2TB90 917 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ZNF773Q6PK81 442 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 GDPD4Q6W3E5 623 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 MACC1Q6ZN28 852 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 LGI4Q8N135 537 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CACTIN-AS1Q8N1I8 211 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 PTERQ96BW5 349 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 TMEM175Q9BSA9 504 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ARNT2Q9HBZ2 717 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ITM2CQ9NQX7 267 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SPO11Q9Y5K1 396 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 MYH3P11055 1940 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CCDC88AQ3V6T2 1871 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SAP18O00422 153 aaKnown RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 WNT9AO14904 365 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 TLL1O43897 1013 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 IDSP22304 550 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 HTR1EP28566 365 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SF1Q15637 639 aaKnown RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 ATP6AP1Q15904 470 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 MRPL10Q7Z7H8 261 aaKnown RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 ZNF671Q8TAW3 534 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SLC38A4Q969I6 547 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 FUBP1Q96AE4 644 aaKnown RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 NDEL1Q9GZM8 345 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 MAGEE1Q9HCI5 957 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 TUBA8Q9NY65 449 aaPredicted RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 H3BNH8 94 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 STC2O76061 302 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 NUDT6P53370 316 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 LSAMPQ13449 338 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 SEMA3AQ14563 771 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 ZNF514Q96K75 400 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 CSNK1G1Q9HCP0 422 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 ZCCHC3Q9NUD5 404 aaKnown RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 ZNF624Q9P2J8 865 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 ITGB1BP2Q9UKP3 347 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 LOC100130705A0A1B0GUX0 176 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TAF4O00268 1085 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBX1O43435 398 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 XPNPEP2O43895 674 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 ATP1B2P14415 290 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 CPOXP36551 454 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 COPZ1P61923 177 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 STX4Q12846 297 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 MTAPQ13126 283 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 IRF5Q13568 498 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 C22orf39Q6P5X5 142 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 BRAT1Q6PJG6 821 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 KLHL17Q6TDP4 642 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 FAM20CQ8IXL6 584 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 SRFBP1Q8NEF9 429 aaKnown RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 L3HYPDHQ96EM0 354 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PTPN18Q99952 460 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 POLR2J3Q9H1A7 115 aaKnown RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 CTPS2Q9NRF8 586 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 ZDHHC7Q9NXF8 308 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PCDHB3Q9Y5E6 796 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 INPPL1O15357 1258 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 OR1F1O43749 312 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 NFATC1O95644 943 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 BMP2P12643 396 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 CAPZA2P47755 286 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PTPN5P54829 565 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 RAB14P61106 215 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms