RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 LRRC37A2A6NM11 1700 aa18.09■□□□□ 0.49
SMPD1-201ENST00000342245 SIX3O95343 332 aaPredicted RBP18.08■□□□□ 0.49
SMPD1-201ENST00000342245 MLYCDO95822 493 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 LCP1P13796 627 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 DDCP20711 480 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 RPP38P78345 283 aaKnown RBP18.08■□□□□ 0.49
SMPD1-201ENST00000342245 CREMQ03060 361 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 KCTD2Q14681 263 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 C6orf136Q5SQH8 315 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 ACOT1Q86TX2 421 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 BTN2A2Q8WVV5 523 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 NTAN1Q96AB6 310 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 HRASLS5Q96KN8 279 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 TRIM45Q9H8W5 580 aaPredicted RBP18.08■□□□□ 0.49
SMPD1-201ENST00000342245 COQ3Q9NZJ6 369 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 SRRDQ9UH36 339 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 TNFSF13BQ9Y275 285 aa18.08■□□□□ 0.49
SMPD1-201ENST00000342245 A0A1W2PRG6 482 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 PCP4L1A6NKN8 68 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 FAM25EA8MYX2 175 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 CYP7B1O75881 506 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 HOXA9P31269 272 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 PSPHP78330 225 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 DAB2P98082 770 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 LAMTOR4Q0VGL1 99 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 FOXD4Q12950 439 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-201ENST00000342245 NPRL3Q12980 569 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 TATDN3Q17R31 274 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 PDZK1Q5T2W1 519 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 ATG9BQ674R7 924 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 PM20D1Q6GTS8 502 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 CCDC149Q6ZUS6 474 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 ANKS3Q6ZW76 656 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 ADGRG3Q86Y34 549 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 OR7D4Q8NG98 312 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 DNAJB8Q8NHS0 232 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 GPR151Q8TDV0 419 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 NT5C3BQ969T7 300 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 COQ8BQ96D53 544 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 GLIS2Q9BZE0 524 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-201ENST00000342245 CDT1Q9H211 546 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 IL1RAPQ9NPH3 570 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 SAMD4AQ9UPU9 718 aaKnown RBP18.08■□□□□ 0.48
SMPD1-201ENST00000342245 NOSIPQ9Y314 301 aaKnown RBP18.08■□□□□ 0.48
SMPD1-201ENST00000342245 CMAHPQ9Y471 501 aa18.08■□□□□ 0.48
SMPD1-201ENST00000342245 A0A096LPI6 279 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 AOC2O75106 756 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 SERPINA1P01009 418 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ZNF250P15622 560 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 C21orf33P30042 268 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ARPP19P56211 112 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ZNF33BQ06732 778 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 PCDH1Q08174 1060 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 AANATQ16613 207 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 INO80DQ53TQ3 878 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-201ENST00000342245 CACHD1Q5VU97 1274 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 FAM219BQ5XKK7 198 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 MZT2BQ6NZ67 158 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 GPAT4Q86UL3 456 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 C9orf62Q8N4C0 152 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 EXT2Q93063 718 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 DACT3Q96B18 629 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-201ENST00000342245 PTTG3PQ9NZH4 202 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ZNF224Q9NZL3 707 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 EVLQ9UI08 416 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-201ENST00000342245 CITO14578 2027 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 IQCMA0A1B0GVH7 501 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 MYL12BO14950 172 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ZNF623O75123 536 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 MYL12AP19105 171 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 AKT1P31749 480 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 SCAPQ12770 1279 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 TMEM207Q6UWW9 146 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 UNC93AQ86WB7 457 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ZSWIM9Q86XI8 627 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 OR8H3Q8N146 312 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 STX19Q8N4C7 294 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 EFHBQ8N7U6 833 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 RNF149Q8NC42 400 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 HERVK_113Q902F9 699 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 GGHQ92820 318 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ZBTB18Q99592 522 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 FICDQ9BVA6 458 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 FARSBQ9NSD9 589 aaKnown RBP18.07■□□□□ 0.48
SMPD1-201ENST00000342245 TMEM39AQ9NV64 488 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 PCDH10Q9P2E7 1040 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ZNF175Q9Y473 711 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 NEUROG3Q9Y4Z2 214 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 ALG5Q9Y673 324 aa18.07■□□□□ 0.48
SMPD1-201ENST00000342245 A0A1B0GVM2 712 aa18.06■□□□□ 0.48
SMPD1-201ENST00000342245 SLC12A8A0AV02 714 aa18.06■□□□□ 0.48
SMPD1-201ENST00000342245 RGS20O76081 388 aa18.06■□□□□ 0.48
SMPD1-201ENST00000342245 KIR2DL3P43628 341 aa18.06■□□□□ 0.48
SMPD1-201ENST00000342245 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-201ENST00000342245 RRAS2P62070 204 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-201ENST00000342245 TMEM132DQ14C87 1099 aa18.06■□□□□ 0.48
SMPD1-201ENST00000342245 GLYR1Q49A26 553 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-201ENST00000342245 SOWAHCQ53LP3 525 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-201ENST00000342245 CLLU1Q5K131 121 aa18.06■□□□□ 0.48
SMPD1-201ENST00000342245 COMMD7Q86VX2 200 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms