RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TAC3Q9UHF0 121 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 TLK1Q9UKI8 766 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 SDK2Q58EX2 2172 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 TLCD2A6NGC4 264 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 KRT38O76015 456 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 STATHP02808 62 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 HIST1H2AGP0C0S8 130 aaPredicted RBP12.75□□□□□ -0.37
TUBD1-202ENST00000340993 FOLR1P15328 257 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 CD1DP15813 335 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 TFEBP19484 476 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 HIST1H2ADP20671 130 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 RPA3P35244 121 aaPredicted RBP12.75□□□□□ -0.37
TUBD1-202ENST00000340993 MLLT3P42568 568 aaPredicted RBP12.75□□□□□ -0.37
TUBD1-202ENST00000340993 TUBB4BP68371 445 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 IFFO1Q0D2I5 559 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 NAE1Q13564 534 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 ZIC1Q15915 447 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 ANKS6Q68DC2 871 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 ARHGAP22Q7Z5H3 698 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 ADCK2Q7Z695 626 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 EIF1ADQ8N9N8 165 aaKnown RBP12.75□□□□□ -0.37
TUBD1-202ENST00000340993 AGBL5Q8NDL9 886 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 OR2L8Q8NGY9 312 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 WDR36Q8NI36 951 aaKnown RBP12.75□□□□□ -0.37
TUBD1-202ENST00000340993 USP7Q93009 1102 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 ESAMQ96AP7 390 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 LIN37Q96GY3 246 aaPredicted RBP12.75□□□□□ -0.37
TUBD1-202ENST00000340993 PRR11Q96HE9 360 aaPredicted RBP12.75□□□□□ -0.37
TUBD1-202ENST00000340993 SCYL1Q96KG9 808 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 HIST1H2AHQ96KK5 128 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 OR6C1Q96RD1 312 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 HIST1H2AJQ99878 128 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 CCDC77Q9BR77 488 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 H2AFJQ9BTM1 129 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 IGSF5Q9NSI5 407 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 IRAK4Q9NWZ3 460 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 SLC39A1Q9NY26 324 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 FOXJ2Q9P0K8 574 aa12.75□□□□□ -0.37
TUBD1-202ENST00000340993 PSMC3IPQ9P2W1 217 aaPredicted RBP12.75□□□□□ -0.37
TUBD1-202ENST00000340993 ANKRD11Q6UB99 2663 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 CTSBP07858 339 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 CRABP2P29373 138 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 TBPL1P62380 186 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 PRAMEF17Q5VTA0 474 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 KIAA1614Q5VZ46 1190 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 LRRC8EQ6NSJ5 796 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 EMBQ6PCB8 327 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 CENPLQ8N0S6 344 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 FLVCR1-AS1Q8TAF5 88 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 FCRL4Q96PJ5 515 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SLC12A9Q9BXP2 914 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 ZNF768Q9H5H4 540 aaKnown RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 POLR1BQ9H9Y6 1135 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 RNF112Q9ULX5 631 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SH2B3Q9UQQ2 575 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 ACOT9Q9Y305 439 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 ZZEF1O43149 2961 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 A0A0J9YY10 115 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 A0A1W2PPV9 198 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 FAM221BA6H8Z2 402 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SUPT3HB4E1H0 165 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 UBXN8O00124 270 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 EIF3FO00303 357 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 HCRTR1O43613 425 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SUPT3HO75486 399 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 KRT37O76014 449 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 WISP3O95389 354 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SNRPAP09012 282 aaKnown RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 LTA4HP09960 611 aaKnown RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 RBMS1P29558 406 aaKnown RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 GDF5P43026 501 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SERPINB9P50453 376 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SP140Q13342 867 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SQSTM1Q13501 440 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 TUBB3Q13509 450 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 AGTRAPQ6RW13 159 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 CYP4X1Q8N118 509 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 C19orf47Q8N9M1 422 aaKnown RBP12.74□□□□□ -0.37
TUBD1-202ENST00000340993 NXPE2Q96DL1 559 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 TSNARE1Q96NA8 513 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 TRAPPC9Q96Q05 1148 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 DPYSL5Q9BPU6 564 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 DHRS4Q9BTZ2 278 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 RAB11FIP5Q9BXF6 653 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 TRIM54Q9BYV2 358 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 DERL2Q9GZP9 239 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 POPDC3Q9HBV1 291 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 FAM60AQ9NP50 221 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 SPATA7Q9P0W8 599 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 EPHA6Q9UF33 1036 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 RAB21Q9UL25 225 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 PLAAQ9Y263 795 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 B3GALT1Q9Y5Z6 326 aa12.74□□□□□ -0.37
TUBD1-202ENST00000340993 URB1O60287 2271 aaKnown RBP12.73□□□□□ -0.37
TUBD1-202ENST00000340993 TEX51A0A1B0GUA7 166 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 A0A1W2PPM1 405 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 E7ENX8 843 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 KRT15P19012 456 aa12.73□□□□□ -0.37
TUBD1-202ENST00000340993 OAS2P29728 719 aaKnown RBP12.73□□□□□ -0.37
TUBD1-202ENST00000340993 KCNC1P48547 511 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms