RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TARM1B6A8C7 271 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 C9J4A7 227 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZSCAN9O15535 394 aaPredicted RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF749O43361 778 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 PSIP1O75475 530 aaKnown RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 OR2B3O76000 313 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 CATP04040 527 aaKnown RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 TUBB4AP04350 444 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 CBSLP0DN79 551 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 AGXTP21549 392 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 CBSP35520 551 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 SLC1A2P43004 574 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 PTGIRP43119 386 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 GABRA4P48169 554 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 ERV3-1Q14264 604 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 ARHGAP19Q14CB8 494 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 SF1Q15637 639 aaKnown RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZIC1Q15915 447 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 CYP2A13Q16696 494 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 KCTD19Q17RG1 926 aaPredicted RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 DEFB109BQ30KR1 87 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZC3H12BQ5HYM0 836 aaKnown RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 RHBDD2Q6NTF9 364 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 UGT3A1Q6NUS8 523 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 CNSTQ6PJW8 725 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 GALNT7Q86SF2 657 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 KCNMB4Q86W47 210 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 DENND6AQ8IWF6 608 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 SYTL1Q8IYJ3 562 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 AGGF1Q8N302 714 aaeCLIP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 DNAJC22Q8N4W6 341 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 LMNTD1Q8N9Z9 388 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 SLC38A9Q8NBW4 561 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 FBXO15Q8NCQ5 510 aaPredicted RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 DLG3Q92796 817 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 CAPZA3Q96KX2 299 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 EBNA1BP2Q99848 306 aaKnown RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 TRIM56Q9BRZ2 755 aaKnown RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 DHRS4Q9BTZ2 278 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 KLHL25Q9H0H3 589 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 FAM60AQ9NP50 221 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 ENAMQ9NRM1 1142 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 IL1RAPL1Q9NZN1 696 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 FBXO5Q9UKT4 447 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 FARSAQ9Y285 508 aaKnown RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 PADI2Q9Y2J8 665 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 HEMK1Q9Y5R4 338 aaPredicted RBP12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 NFS1Q9Y697 457 aa12.84□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF462Q96JM2 2506 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 H3BMH7 237 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 MYO1CO00159 1063 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 PRICKLE3O43900 615 aaPredicted RBP12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 VPS26AO75436 327 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 ERGP11308 486 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 MAGP20916 626 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 IVDP26440 423 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 SKIV2L2P42285 1042 aaKnown RBP12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 BDKRB1P46663 353 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 CTBP1Q13363 440 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 KLHL38Q2WGJ6 581 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 HSP90AA5PQ58FG0 334 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 ACSBG2Q5FVE4 666 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 TCTE1Q5JU00 501 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 YOD1Q5VVQ6 348 aaPredicted RBP12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 FAM199XQ6PEV8 388 aaPredicted RBP12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 CNTN4Q8IWV2 1026 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 KLHL7Q8IXQ5 586 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 C2CD4AQ8NCU7 369 aaPredicted RBP12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 OR9A1PQ8NGU1 263 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 INPP5DQ92835 1189 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 CHST8Q9H2A9 424 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 FBXO6Q9NRD1 293 aaPredicted RBP12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 EURLQ9NYK6 297 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 MAN2B2Q9Y2E5 1009 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 DHRS7Q9Y394 339 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 KCNMB2Q9Y691 235 aa12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 TLN1Q9Y490 2541 aaKnown RBP12.83□□□□□ -0.36
SIRPB3P-201ENST00000340424 CDC14CA4D256 554 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 MPC1LP0DKB6 136 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 PLA2G2AP14555 144 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 PMS2P54278 862 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 ARSFP54793 590 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 DCDP81605 110 aaKnown RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 DHX9Q08211 1270 aaKnown RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 NFATC3Q12968 1075 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 FRG1Q14331 258 aaKnown RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 NCF4Q15080 339 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 HIF1AQ16665 826 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 PRAMEF17Q5VTA0 474 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 HIBCHQ6NVY1 386 aaPredicted RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 ENDOVQ8N8Q3 282 aaKnown RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 BBOF1Q8ND07 529 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 C9orf43Q8TAL5 461 aaPredicted RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 SMPDL3AQ92484 453 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 RNF31Q96EP0 1072 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 SNF8Q96H20 258 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 IL17FQ96PD4 163 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 AARSD1Q9BTE6 412 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms