RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 TSPAN17Q96FV3 270 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 TAAR9Q96RI9 348 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 TWSG1Q9GZX9 223 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 POPDC3Q9HBV1 291 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 PDE10AQ9Y233 779 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 EXOC1LA0A1B0GW35 172 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 NPEPPSL1A6NEC2 478 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 SLC9B1P1A6NJY1 282 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 ISM1B1AKI9 464 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 B4E171 279 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 CDC7O00311 574 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 PRAMEF10O60809 474 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 C8GP07360 202 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 ST6GAL1P15907 406 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 PSMB5P28074 263 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 GCAP28676 217 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 TSPAN7P41732 249 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 MAPK10P53779 464 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 RAB10P61026 200 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 CYP2A13Q16696 494 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 ANKS6Q68DC2 871 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 SUSD1Q6UWL2 747 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 NKAPQ8N5F7 415 aaKnown RBP13.73□□□□□ -0.21
CTSL-201ENST00000340342 BMPERQ8N8U9 685 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 FBXO15Q8NCQ5 510 aaPredicted RBP13.73□□□□□ -0.21
CTSL-201ENST00000340342 PPFIBP2Q8ND30 876 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 AENQ8WTP8 325 aaKnown RBP13.73□□□□□ -0.21
CTSL-201ENST00000340342 DCAKDQ8WVC6 231 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 KCNE4Q8WWG9 221 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 USP7Q93009 1102 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 PDLIM5Q96HC4 596 aaKnown RBP13.73□□□□□ -0.21
CTSL-201ENST00000340342 CD180Q99467 661 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 RAB11FIP5Q9BXF6 653 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 SLC12A9Q9BXP2 914 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 ASPSCR1Q9BZE9 553 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 PARVBQ9HBI1 364 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 SYTL2Q9HCH5 934 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 SIDT1Q9NXL6 827 aaKnown RBP13.73□□□□□ -0.21
CTSL-201ENST00000340342 SPATA7Q9P0W8 599 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 SEMA5BQ9P283 1151 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 KLHL20Q9Y2M5 609 aa13.73□□□□□ -0.21
CTSL-201ENST00000340342 ITPR1Q14643 2758 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 LOC400499M0QZD8 3231 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 MDC1Q14676 2089 aaKnown RBP13.72□□□□□ -0.21
CTSL-201ENST00000340342 EBLN1P0CF75 366 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 SLC35E2BP0CK96 405 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 CCDC166P0CW27 439 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 ERGP11308 486 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 NELFEP18615 380 aaKnown RBP13.72□□□□□ -0.21
CTSL-201ENST00000340342 CYP2A7P20853 494 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 CD82P27701 267 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 MSH2P43246 934 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 RAB15P59190 212 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 SP140Q13342 867 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 TSTA3Q13630 321 aaPredicted RBP13.72□□□□□ -0.21
CTSL-201ENST00000340342 KIR2DS3Q14952 304 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 EMBQ6PCB8 327 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 SBSNQ6UWP8 590 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 RAPH1Q70E73 1250 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 SPACA3Q8IXA5 215 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 RAB42Q8N4Z0 105 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 MCOLN3Q8TDD5 553 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 ZNF480Q8WV37 535 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 UBLCP1Q8WVY7 318 aaPredicted RBP13.72□□□□□ -0.21
CTSL-201ENST00000340342 SLC41A2Q96JW4 573 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 CTRCQ99895 268 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 DDA1Q9BW61 102 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 PITPNM3Q9BZ71 974 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 APMAPQ9HDC9 416 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 FBXO8Q9NRD0 319 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 SNX15Q9NRS6 342 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 C1GALT1Q9NS00 363 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 LNPEPQ9UIQ6 1025 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 PCDHGA3Q9Y5H0 932 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 IKBKGQ9Y6K9 419 aa13.72□□□□□ -0.21
CTSL-201ENST00000340342 A0A1W2PPV9 198 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 C9orf172C9J069 976 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 SLC16A5O15375 505 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 ZBTB11O95625 1053 aaPredicted RBP13.71□□□□□ -0.22
CTSL-201ENST00000340342 ALDOAP04075 364 aaKnown RBP13.71□□□□□ -0.22
CTSL-201ENST00000340342 FOLR1P15328 257 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 ITPKBP27987 946 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 IMPA1P29218 277 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 PNLIPRP1P54315 467 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 YBX1P67809 324 aaKnown RBP13.71□□□□□ -0.22
CTSL-201ENST00000340342 IRF9Q00978 393 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 MC2RQ01718 297 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 TLE3Q04726 772 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 DLG1Q12959 904 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 CSHL1Q14406 222 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 TSNQ15631 228 aaKnown RBP13.71□□□□□ -0.22
CTSL-201ENST00000340342 ZIC1Q15915 447 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 PPP1R3AQ16821 1122 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 DCAF12Q5T6F0 453 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 BROXQ5VW32 411 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 C19orf48Q6RUI8 117 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 SYTL1Q8IYJ3 562 aa13.71□□□□□ -0.22
CTSL-201ENST00000340342 HMGCLL1Q8TB92 370 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms