RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 HCN2Q9UL51 889 aa10.79□□□□□ -0.68
LRP1-202ENST00000338962 SLC22A14Q9Y267 594 aa10.79□□□□□ -0.68
LRP1-202ENST00000338962 AP4S1Q9Y587 144 aa10.79□□□□□ -0.68
LRP1-202ENST00000338962 COL4A3Q01955 1670 aa10.79□□□□□ -0.68
LRP1-202ENST00000338962 EIF4E1BA6NMX2 242 aaKnown RBP10.78□□□□□ -0.68
LRP1-202ENST00000338962 NPC1O15118 1278 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 SPINT1O43278 529 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 SEC22BO75396 215 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 RECQL5O94762 991 aaPredicted RBP10.78□□□□□ -0.68
LRP1-202ENST00000338962 EGFP01133 1207 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 ADRB3P13945 408 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 IL12AP29459 219 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 GRIA3P42263 894 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 AQP4P55087 323 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 ENPP2Q13822 863 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 PTGR1Q14914 329 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 TLR1Q15399 786 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 ZXDCQ2QGD7 858 aaPredicted RBP10.78□□□□□ -0.68
LRP1-202ENST00000338962 GGTA1PQ4G0N0 100 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 SFT2D3Q587I9 215 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 DSG4Q86SJ6 1040 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 RGL4Q8IZJ4 473 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 CATSPER1Q8NEC5 780 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 SELENOMQ8WWX9 145 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 ARRDC3Q96B67 414 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 NUS1Q96E22 293 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 CCM2Q9BSQ5 444 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 EFHD1Q9BUP0 239 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 TMEM245Q9H330 911 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 ALG2Q9H553 416 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 ACTL8Q9H568 366 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 LRTM1Q9HBL6 345 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 DNAJC11Q9NVH1 559 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 CMTM6Q9NX76 183 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 SNX6Q9UNH7 406 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 COQ6Q9Y2Z9 468 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 DTNAQ9Y4J8 743 aa10.78□□□□□ -0.68
LRP1-202ENST00000338962 C15orf38-AP3S2A0A0A6YYH1 394 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 TCRBV3S1A0A5B6 114 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 KRT87PA6NCN2 255 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 IFRD1O00458 451 aaPredicted RBP10.77□□□□□ -0.68
LRP1-202ENST00000338962 AREL1O15033 823 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 ANKRD28O15084 1053 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 LZTS3O60299 673 aaPredicted RBP10.77□□□□□ -0.68
LRP1-202ENST00000338962 CATP04040 527 aaKnown RBP10.77□□□□□ -0.68
LRP1-202ENST00000338962 C6P13671 934 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 ITPKAP23677 461 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 VARSP26640 1264 aaKnown RBP10.77□□□□□ -0.68
LRP1-202ENST00000338962 MAPK9P45984 424 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 PREPP48147 710 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 MRPS21P82921 87 aaKnown RBP10.77□□□□□ -0.68
LRP1-202ENST00000338962 ABRQ12979 859 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 RABL3Q5HYI8 236 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 RAET1GQ6H3X3 334 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 OR52E8Q6IFG1 317 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 NEK5Q6P3R8 708 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 TMEM220Q6QAJ8 160 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 ARPINQ7Z6K5 226 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 LILRA2Q8N149 483 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 GALNT15Q8N3T1 639 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 OR2T34Q8NGX1 318 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 OR2T3Q8NH03 318 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 GATA6Q92908 595 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 CLDN23Q96B33 292 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 MTFMTQ96DP5 389 aaKnown RBP10.77□□□□□ -0.68
LRP1-202ENST00000338962 FOPNLQ96NB1 174 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 PKP2Q99959 881 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 TRIM8Q9BZR9 551 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 ATG10Q9H0Y0 220 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 TBC1D17Q9HA65 648 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 C1orf109Q9NX04 203 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 THAP10Q9P2Z0 257 aaPredicted RBP10.77□□□□□ -0.68
LRP1-202ENST00000338962 EGFL7Q9UHF1 273 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 PCDHA9Q9Y5H5 950 aa10.77□□□□□ -0.68
LRP1-202ENST00000338962 FAM170BA6NMN3 283 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 C1QTNF3-AMACRE9PGA6 284 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 PSIP1O75475 530 aaKnown RBP10.77□□□□□ -0.69
LRP1-202ENST00000338962 RNASEH2AO75792 299 aaKnown RBP10.77□□□□□ -0.69
LRP1-202ENST00000338962 PDYNP01213 254 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 PBLDP30039 288 aaPredicted RBP10.77□□□□□ -0.69
LRP1-202ENST00000338962 SLC7A1P30825 629 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 GPR1P46091 355 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 DYNC1I2Q13409 638 aaKnown RBP10.77□□□□□ -0.69
LRP1-202ENST00000338962 SLC2A7Q6PXP3 512 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 ZNF765Q7L2R6 523 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 TRAPPC5Q8IUR0 188 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 MMAAQ8IVH4 418 aaKnown RBP10.77□□□□□ -0.69
LRP1-202ENST00000338962 KIAA2013Q8IYS2 634 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 DPP10Q8N608 796 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 GLB1L3Q8NCI6 653 aaPredicted RBP10.77□□□□□ -0.69
LRP1-202ENST00000338962 ADCY4Q8NFM4 1077 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 ATL1Q8WXF7 558 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 TMEM125Q96AQ2 219 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 FBXL8Q96CD0 374 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 DTNBP1Q96EV8 351 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 MAGEB10Q96LZ2 347 aaPredicted RBP10.77□□□□□ -0.69
LRP1-202ENST00000338962 FAM129BQ96TA1 746 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 CENPKQ9BS16 269 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 ACPTQ9BZG2 426 aa10.77□□□□□ -0.69
LRP1-202ENST00000338962 TRIM4Q9C037 500 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms