RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CENPUQ71F23 418 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 PPP1R32Q7Z5V6 425 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 OR4N4Q8N0Y3 316 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 Q8NA96 180 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 CLEC18CQ8NCF0 446 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 CPT1CQ8TCG5 803 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 LPGAT1Q92604 370 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 PEX13Q92968 403 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 NDC1Q9BTX1 674 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 CHRNA10Q9GZZ6 450 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 SYNPO2LQ9H987 977 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 TXLNGQ9NUQ3 528 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 ANKMY1Q9P2S6 941 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 SOX13Q9UN79 622 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 PPP2R2CQ9Y2T4 447 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 ANKRD12Q6UB98 2062 aa12.83□□□□□ -0.36
NUDCD3-201ENST00000338427 A0A0J9YVX5 310 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 F8W8V4 182 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 TPSB2P20231 275 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 CHRM3P20309 590 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 RPS3P23396 243 aaKnown RBP eCLIP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 VSX2P58304 361 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 TPSAB1Q15661 275 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 INPP5JQ15735 1006 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 AARS2Q5JTZ9 985 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 WASHC2DQ5SRD0 308 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 JMJD6Q6NYC1 403 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 FBXO42Q6P3S6 717 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 MED25Q71SY5 747 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 OTOAQ7RTW8 1153 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 MRGPREQ86SM8 312 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 AGGF1Q8N302 714 aaeCLIP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 TMEM102Q8N9M5 508 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 DPH2Q9BQC3 489 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 ACAT2Q9BWD1 397 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 TSSK1BQ9BXA7 367 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 P4HTMQ9NXG6 502 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 GNPTGQ9UJJ9 305 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 ZNF451Q9Y4E5 1061 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 MAP4K5Q9Y4K4 846 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 MAU2Q9Y6X3 613 aa12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 MDC1Q14676 2089 aaKnown RBP12.82□□□□□ -0.36
NUDCD3-201ENST00000338427 S1PR4O95977 384 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 FOLR3P41439 243 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 CTBP1Q13363 440 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 TMED2Q15363 201 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 NEPROQ6NW34 567 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 TTC23LQ6PF05 361 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 SUSD1Q6UWL2 747 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 C4orf22Q6V702 233 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 COX15Q7KZN9 410 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 SDCCAG8Q86SQ7 713 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 RAB43Q86YS6 212 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 DENND6AQ8IWF6 608 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 TRIM58Q8NG06 486 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 OR2A1Q8NGT9 310 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 OR2Y1Q8NGV0 311 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 UBE2Q2Q8WVN8 375 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 MAIP1Q8WWC4 291 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 COL26A1Q96A83 441 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 RAD51AP1Q96B01 352 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 PTERQ96BW5 349 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 PANX3Q96QZ0 392 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 DHRS4Q9BTZ2 278 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 SOX17Q9H6I2 414 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 ZNF552Q9H707 407 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 MRM3Q9HC36 420 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 FBXO6Q9NRD1 293 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 CUTCQ9NTM9 273 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 GPR83Q9NYM4 423 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 ZC3H7BQ9UGR2 993 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 ZKSCAN5Q9Y2L8 839 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 PCM1Q15154 2024 aa12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 UTP20O75691 2785 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-201ENST00000338427 BLACEA4D250 179 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 ARHGEF33A8MVX0 844 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 FFAR3O14843 346 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 GPR42O15529 346 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 KDM1AO60341 852 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 SORBS2O94875 1100 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 EIF2S1P05198 315 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 PKMP14618 531 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 COILP38432 576 aaPredicted RBP12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 MRPL49Q13405 166 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 CUL1Q13616 776 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 TSTA3Q13630 321 aaPredicted RBP12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 GBX1Q14549 363 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 NKG7Q16617 165 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 TYSND1Q2T9J0 566 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 EIF2S3LQ2VIR3 472 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 KLHL38Q2WGJ6 581 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 ANKRD20A4Q4UJ75 823 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 DCAF10Q5QP82 559 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 SLC6A19Q695T7 634 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 CASC4Q6P4E1 433 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 ZNF549Q6P9A3 640 aa12.8□□□□□ -0.36
NUDCD3-201ENST00000338427 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms