RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SLC25A24Q6NUK1 477 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 AMIGO3Q86WK7 504 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 TMEM126BQ8IUX1 230 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 SIX5Q8N196 739 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 OR10Q1Q8NGQ4 319 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 ZNF354BQ96LW1 612 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 FCRL3Q96P31 734 aaPredicted RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 RPF2Q9H7B2 306 aaKnown RBP13.45□□□□□ -0.26
RTN4-202ENST00000337526 PREBQ9HCU5 417 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 CRTAC1Q9NQ79 661 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 LMO7Q8WWI1 1683 aa13.45□□□□□ -0.26
RTN4-202ENST00000337526 PDPK1O15530 556 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 CREG1O75629 220 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 CNTN5O94779 1100 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 GNRH1P01148 92 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 PRKACGP22612 351 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 PITX1P78337 314 aaPredicted RBP13.44□□□□□ -0.26
RTN4-202ENST00000337526 SCARB2Q14108 478 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 TGFBIQ15582 683 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 PPP1R3AQ16821 1122 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 KLHL22Q53GT1 634 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 CRB2Q5IJ48 1285 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 ZNF311Q5JNZ3 666 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 SMARCD3Q6STE5 483 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 GALNT13Q8IUC8 556 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 ZFAND2BQ8WV99 257 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 SLC35G5Q96KT7 338 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 TAS2R7Q9NYW3 318 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 FAM172BPA6NC97 362 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 WWP2O00308 870 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 SDHDO14521 159 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 RGS20O76081 388 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 VIPP01282 170 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 CCL14Q16627 93 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 DNAJB7Q7Z6W7 309 aaPredicted RBP13.44□□□□□ -0.26
RTN4-202ENST00000337526 C1orf52Q8N6N3 182 aaKnown RBP13.44□□□□□ -0.26
RTN4-202ENST00000337526 C9orf43Q8TAL5 461 aaPredicted RBP13.44□□□□□ -0.26
RTN4-202ENST00000337526 COL21A1Q96P44 957 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 KCNC2Q96PR1 638 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 OR51V1Q9H2C8 321 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 NFKBIEO00221 500 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 DIRAS1O95057 198 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 EMX2Q04743 252 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 AKIRIN2Q53H80 203 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 ZUFSPQ96AP4 578 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 PCYT2Q99447 389 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 OR2AG1Q9H205 316 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 NECTIN3Q9NQS3 549 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 TMEM9Q9P0T7 183 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 CYTH4Q9UIA0 394 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 SPIN1Q9Y657 262 aaPredicted RBP13.44□□□□□ -0.26
RTN4-202ENST00000337526 FAM72CH0Y354 149 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 M0QX08 132 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 PIRO00625 290 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 EPOP01588 193 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 PCCBP05166 539 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 C8AP07357 584 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 SLC35G6P0C7Q6 338 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 CMPK1P30085 196 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 ACADVLP49748 655 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 NUDT6P53370 316 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 CAP1Q01518 475 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 FCHO2Q0JRZ9 810 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 SLC10A2Q12908 348 aaPredicted RBP13.44□□□□□ -0.26
RTN4-202ENST00000337526 FAM72AQ5TYM5 149 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 FAM91A1Q658Y4 838 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 FAM72DQ6L9T8 149 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 ADGRG6Q86SQ4 1221 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 FAM72BQ86X60 149 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 PEX5LQ8IYB4 626 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 OR8H1Q8NGG4 311 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 OR14C36Q8NHC7 312 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 TXLNGYQ9BZA5 131 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 MKS1Q9NXB0 559 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 MALT1Q9UDY8 824 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 SCML2Q9UQR0 700 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 COLEC10Q9Y6Z7 277 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 MYH11P35749 1972 aa13.44□□□□□ -0.26
RTN4-202ENST00000337526 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 ORC5O43913 435 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 NOS1APO75052 506 aaPredicted RBP13.43□□□□□ -0.26
RTN4-202ENST00000337526 FKTNO75072 461 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 CSTF2P33240 577 aaKnown RBP eCLIP13.43□□□□□ -0.26
RTN4-202ENST00000337526 SLBPQ14493 270 aaKnown RBP eCLIP13.43□□□□□ -0.26
RTN4-202ENST00000337526 MEP1AQ16819 746 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 ZNF829Q3KNS6 432 aaPredicted RBP13.43□□□□□ -0.26
RTN4-202ENST00000337526 MS4A13Q5J8X5 152 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 KLHL35Q6PF15 583 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 CYS1Q717R9 158 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 UFD1Q92890 307 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 ZNF514Q96K75 400 aaPredicted RBP13.43□□□□□ -0.26
RTN4-202ENST00000337526 MARCH7Q9H992 704 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 BAZ2AQ9UIF9 1905 aaKnown RBP13.43□□□□□ -0.26
RTN4-202ENST00000337526 CAPN15O75808 1086 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 CLDN7O95471 211 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 FPR1P21462 350 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 RORCP51449 518 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 CRISP3P54108 245 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 ARSFP54793 590 aa13.43□□□□□ -0.26
RTN4-202ENST00000337526 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms