RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CLCA4Q14CN2 919 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 METTL3Q86U44 580 aaKnown RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 RPL3LQ92901 407 aaKnown RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 RACGAP1Q9H0H5 632 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 ZNF304Q9HCX3 659 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 FKBPLQ9UIM3 349 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 AP2A2O94973 939 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 UROSP10746 265 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 EFR3AQ14156 821 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 ATP6AP1Q15904 470 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 TIGD5Q53EQ6 642 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 CPTPQ5TA50 214 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 CRYBG2Q8N1P7 616 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 TTC29Q8NA56 475 aaPredicted RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 SIMC1Q8NDZ2 872 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 PLSCR3Q9NRY6 295 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 KCTD5Q9NXV2 234 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 PDP1Q9P0J1 537 aaPredicted RBP15.73■□□□□ 0.11
NPHP3-201ENST00000337331 EMCNQ9ULC0 261 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 ABCG2Q9UNQ0 655 aa15.73■□□□□ 0.11
NPHP3-201ENST00000337331 ACSL4O60488 711 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 STX11O75558 287 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 ACADMP11310 421 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 RPIAP49247 311 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 MAB21L1Q13394 359 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 BCL7AQ4VC05 210 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 ARSKQ6UWY0 536 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 ANKRD46Q86W74 232 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 BRSK1Q8TDC3 778 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 FCRL5Q96RD9 977 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 ITPAQ9BY32 194 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 DNAJB9Q9UBS3 223 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 CORO2BQ9UQ03 480 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 CLCA3PQ9Y6N3 262 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 CRYBG1Q9Y4K1 1723 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 SLC1A7O00341 560 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 SIX3O95343 332 aaPredicted RBP15.72■□□□□ 0.11
NPHP3-201ENST00000337331 COL6A1P12109 1028 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 PPIBP23284 216 aaKnown RBP15.72■□□□□ 0.11
NPHP3-201ENST00000337331 OLIG2Q13516 323 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 WSCD2Q2TBF2 565 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 C11orf88Q6PI97 169 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 OR10Q1Q8NGQ4 319 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 OR10A6Q8NH74 314 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 NTAN1Q96AB6 310 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 PPCDCQ96CD2 204 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 AURKBQ96GD4 344 aaPredicted RBP15.72■□□□□ 0.11
NPHP3-201ENST00000337331 PPIL3Q9H2H8 161 aaKnown RBP15.72■□□□□ 0.11
NPHP3-201ENST00000337331 EMC3Q9P0I2 261 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 MKL2Q9ULH7 1088 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 TULP3O75386 442 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 ASGR1P07306 291 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 OLR1P78380 273 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 HFE2Q6ZVN8 426 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 PCNPQ8WW12 178 aaKnown RBP15.72■□□□□ 0.11
NPHP3-201ENST00000337331 Q96MT0 163 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 SLC2A11Q9BYW1 496 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 TNKS2Q9H2K2 1166 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 C4AP0C0L4 1744 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 C4BP0C0L5 1744 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 KCPQ6ZWJ8 1503 aa15.72■□□□□ 0.11
NPHP3-201ENST00000337331 COL14A1Q05707 1796 aaKnown RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 PRAMEF33A0A0G2JMD5 474 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 SLC9A3R1O14745 358 aaPredicted RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 ACOX3O15254 700 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 PRAMEF10O60809 474 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 DPP6P42658 865 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 GJA9P57773 515 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 ZNF280AP59817 542 aaPredicted RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 SP3Q02447 781 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 RPL6Q02878 288 aaKnown RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 GRSF1Q12849 480 aaKnown RBP eCLIP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 TUBB3Q13509 450 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 ZNF431Q8TF32 576 aaPredicted RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 SLC35F5Q8WV83 523 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 POP5Q969H6 163 aaKnown RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 MAGEH1Q9H213 219 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 RGPD2P0DJD1 1756 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 TCRBV3S1A0A5B6 114 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 IRAK2O43187 625 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 HCRTO43612 131 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 CDK14O94921 469 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 KDM4BO94953 1096 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 ATP12AP54707 1039 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 LCN1P1Q5VSP4 162 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 KRT74Q7RTS7 529 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 ZNF671Q8TAW3 534 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 PSD2Q9BQI7 771 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 TTYH1Q9H313 450 aaPredicted RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 MUC13Q9H3R2 512 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 AKTIPQ9H8T0 292 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 DNAJC11Q9NVH1 559 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 DUS2Q9NX74 493 aaKnown RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 SIX4Q9UIU6 781 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 FBXO10Q9UK96 956 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 MRPS23Q9Y3D9 190 aaKnown RBP15.71■□□□□ 0.11
NPHP3-201ENST00000337331 A0A0G2JPF8 293 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 HNRNPCL3B7ZW38 293 aa15.71■□□□□ 0.11
NPHP3-201ENST00000337331 POLR1CO15160 346 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms