RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PRDM5Q9NQX1 630 aaPredicted RBP12.96□□□□□ -0.33
COL2A1-201ENST00000337299 ABCB8Q9NUT2 735 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 ARHGEF33A8MVX0 844 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 PGRMC2O15173 223 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 HLA-DQB2P05538 268 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 THP07101 528 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 ODC1P11926 461 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 GDF5P43026 501 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 SLC26A2P50443 739 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 UGT2B15P54855 530 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 IQCCQ4KMZ1 466 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 LBX2Q6XYB7 198 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 ADGRD2Q7Z7M1 963 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 LGI4Q8N135 537 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 CRYGNQ8WXF5 182 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 ING5Q8WYH8 240 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 COL21A1Q96P44 957 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 HAPLN2Q9GZV7 340 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 PCDHGA11Q9Y5H2 935 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 MEIOCA2RUB1 952 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 UNCXA6NJT0 531 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 FGF10O15520 208 aaPredicted RBP12.96□□□□□ -0.33
COL2A1-201ENST00000337299 TLL1O43897 1013 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 RHOCP08134 193 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 GTF2H2Q13888 395 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 CYP27C1Q4G0S4 372 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 PNCKQ6P2M8 343 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 TOR1AIP2Q8NFQ8 470 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 MINDY3Q9H8M7 445 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 TRAV19A0A0A6YYK7 116 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 RPP40O75818 363 aaKnown RBP12.96□□□□□ -0.34
COL2A1-201ENST00000337299 S100A6P06703 90 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 ERP29P30040 261 aaKnown RBP12.96□□□□□ -0.34
COL2A1-201ENST00000337299 TTPAP49638 278 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 FAM92BQ6ZTR7 304 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 PARP16Q8N5Y8 322 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 DPP10Q8N608 796 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 TM6SF2Q9BZW4 377 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 SMURF1Q9HCE7 757 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 GPR83Q9NYM4 423 aa12.96□□□□□ -0.34
COL2A1-201ENST00000337299 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.34
COL2A1-201ENST00000337299 A0A096LPI6 279 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 DPYSL4O14531 572 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 MID1O15344 667 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 TREHO43280 583 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 SOX14O95416 240 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 FPR1P21462 350 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 HTR1EP28566 365 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 C21orf33P30042 268 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-201ENST00000337299 RPS14P62263 151 aaKnown RBP12.95□□□□□ -0.34
COL2A1-201ENST00000337299 ADPRMQ3LIE5 342 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 AFTPHQ6ULP2 937 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 FAM151BQ6UXP7 276 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-201ENST00000337299 KAT2AQ92830 837 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 MGLLQ99685 303 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 STARD7Q9NQZ5 370 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 KCNE2Q9Y6J6 123 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 NUMA1Q14980 2115 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 A0A0G2JPF8 293 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 HNRNPCL3B7ZW38 293 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 TRBC1P01850 177 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 RLN1P04808 185 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 HNRNPCL4P0DMR1 293 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 TGFBR1P36897 503 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 CDC42EP1Q00587 391 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 EFR3AQ14156 821 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 IDNKQ5T6J7 187 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 GLB1LQ6UWU2 654 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 IKBIPQ70UQ0 350 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 CFAP52Q8N1V2 620 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 FAM109AQ8N4B1 249 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 TMEM151AQ8N4L1 468 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 ZNF614Q8N883 585 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 ANKRD49Q8WVL7 239 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 TMEM125Q96AQ2 219 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 DNAJC27Q9NZQ0 273 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 ZNF214Q9UL59 606 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-201ENST00000337299 MAP4K5Q9Y4K4 846 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 M0R129 80 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 ITGA2P17301 1181 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 IL4RP24394 825 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 AXLP30530 894 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 DCTP40126 519 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 DNAJB13P59910 316 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 KCNA10Q16322 511 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 PLA2G4EQ3MJ16 856 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 GTDC1Q4AE62 458 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 C9orf57Q5W0N0 161 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 OR4F3Q6IEY1 312 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 CYS1Q717R9 158 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 ZNF534Q76KX8 674 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 TAC4Q86UU9 113 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 MAELQ96JY0 434 aaKnown RBP12.95□□□□□ -0.34
COL2A1-201ENST00000337299 RDH12Q96NR8 316 aa12.95□□□□□ -0.34
COL2A1-201ENST00000337299 COPS8Q99627 209 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms