RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 PSMG2Q969U7 264 aa11.6□□□□□ -0.55
LIMK2-202ENST00000333611 SH3KBP1Q96B97 665 aa11.6□□□□□ -0.55
LIMK2-202ENST00000333611 SMIM14Q96QK8 99 aa11.6□□□□□ -0.55
LIMK2-202ENST00000333611 SLC9A7Q96T83 725 aa11.6□□□□□ -0.55
LIMK2-202ENST00000333611 SPON2Q9BUD6 331 aa11.6□□□□□ -0.55
LIMK2-202ENST00000333611 TRAF4Q9BUZ4 470 aaPredicted RBP11.6□□□□□ -0.55
LIMK2-202ENST00000333611 FAM126AQ9BYI3 521 aaPredicted RBP11.6□□□□□ -0.55
LIMK2-202ENST00000333611 SLIRPQ9GZT3 109 aaKnown RBP11.6□□□□□ -0.55
LIMK2-202ENST00000333611 FBXL12Q9NXK8 326 aa11.6□□□□□ -0.55
LIMK2-202ENST00000333611 C3orf18Q9UK00 162 aa11.6□□□□□ -0.55
LIMK2-202ENST00000333611 NUP50Q9UKX7 468 aa11.6□□□□□ -0.55
LIMK2-202ENST00000333611 POLR2AP24928 1970 aaKnown RBP11.6□□□□□ -0.55
LIMK2-202ENST00000333611 DNAJC25-GNG10A0A024R161 153 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 BTN3A1O00481 513 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 MATN3O15232 486 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 GLP2RO95838 553 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 RUNX1T1Q06455 604 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 RPA4Q13156 261 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 CBLBQ13191 982 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 SEMA3BQ13214 749 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 OR4D1Q15615 310 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 TSNQ15631 228 aaKnown RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 PSMD5Q16401 504 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 ARHGAP12Q8IWW6 846 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 TOP6BLQ8N6T0 577 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 SLC23A1Q9UHI7 598 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 RLFQ13129 1914 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 A0A0G2JLL6 359 aaPredicted RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 LEUTXA8MZ59 168 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 GPR32O75388 356 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 HAPLN1P10915 354 aaPredicted RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 WARSP23381 471 aaKnown RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 CCNCP24863 283 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 DGKQP52824 942 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 SRP54P61011 504 aaKnown RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 NKX3-2P78367 333 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 ADARB1P78563 741 aaKnown RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 FAPQ12884 760 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 FAM45BPQ6NSW5 357 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 RASSF6Q6ZTQ3 369 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 PRRT2Q7Z6L0 340 aaPredicted RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 RASAL3Q86YV0 1011 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 LINC01465Q8N7H1 131 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 FAM45AQ8TCE6 357 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 HMCESQ96FZ2 354 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 MS4A7Q9GZW8 240 aaPredicted RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 MMP27Q9H306 513 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 AGO3Q9H9G7 860 aaKnown RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 NECTIN3Q9NQS3 549 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 FBXO8Q9NRD0 319 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 SNTG1Q9NSN8 517 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 GTF2IRD1Q9UHL9 959 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 THP07101 528 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 CAPZA2P47755 286 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 DGKEP52429 567 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 HERVK_113P63132 956 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 C2orf80Q0P641 193 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 EFEMP1Q12805 493 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 AAK1Q2M2I8 961 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 RGMBQ6NW40 437 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 PRMT9Q6P2P2 845 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 CYHR1Q6ZMK1 362 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 CILP2Q8IUL8 1156 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 PHF10Q8WUB8 498 aaKnown RBP11.59□□□□□ -0.55
LIMK2-202ENST00000333611 SLC7A6Q92536 515 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 SEMA3CQ99985 751 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 CNPPD1Q9BV87 410 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 ERVK-6Q9BXR3 956 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 ING3Q9NXR8 418 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 UTS2RQ9UKP6 389 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 RNF6Q9Y252 685 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 ACTL7AQ9Y615 435 aa11.59□□□□□ -0.55
LIMK2-202ENST00000333611 NUP214P35658 2090 aaPredicted RBP11.58□□□□□ -0.56
LIMK2-202ENST00000333611 TRAV20A0A0B4J274 112 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 NPEPPSL1A6NEC2 478 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 CDC7O00311 574 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 DFNA5O60443 496 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 CNTN5O94779 1100 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 TOXO94900 526 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 TBX18O95935 607 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 SDHBP21912 280 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 DNAJB13P59910 316 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 RAD51Q06609 339 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 TIGD6Q17RP2 521 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 TIGD5Q53EQ6 642 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 SETMARQ53H47 684 aaPredicted RBP11.58□□□□□ -0.56
LIMK2-202ENST00000333611 YIF1BQ5BJH7 314 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 DET1Q7L5Y6 550 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 CACTIN-AS1Q8N1I8 211 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 KCTD13Q8WZ19 329 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 PYCR2Q96C36 320 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 FRMD6Q96NE9 622 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 PRKD2Q9BZL6 878 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 ZMYM5Q9UJ78 669 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 ZFC3H1O60293 1989 aaKnown RBP11.58□□□□□ -0.56
LIMK2-202ENST00000333611 LCTP09848 1927 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 A0A096LPI6 279 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 A0A1W2PQ09 198 aa11.58□□□□□ -0.56
LIMK2-202ENST00000333611 FADS2P1A8MWK0 482 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms