RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 EPS8L2Q9H6S3 715 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 CCSER2Q9H7U1 834 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 NDRG4Q9ULP0 352 aaKnown RBP23.03■■□□□ 1.28
TSKU-201ENST00000333090 SAMD4AQ9UPU9 718 aaKnown RBP23.03■■□□□ 1.28
TSKU-201ENST00000333090 ERVW-1Q9UQF0 538 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 A0A0U1RQF3 1178 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 PSMD11O00231 422 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 B4GALT3O60512 393 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 CR2P20023 1033 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 HOXA9P31269 272 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 S100A3P33764 101 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 LACC1Q8IV20 430 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 TRPV1Q8NER1 839 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 MAGEH1Q9H213 219 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 KCNH6Q9H252 994 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 KRT84Q9NSB2 600 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 LOC730098B7Z3J9 87 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 PSMA3P25788 255 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 SLC14A1Q13336 389 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 TAF1CQ15572 869 aaPredicted RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 GPR162Q16538 588 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 DOK6Q6PKX4 331 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 CCDC80Q76M96 950 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 HORMAD1Q86X24 394 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 CCDC71Q8IV32 467 aaPredicted RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 Q8N9G6 341 aaPredicted RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 UROC1Q96N76 676 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 TM9SF3Q9HD45 589 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 IL1RAPQ9NPH3 570 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 OLA1Q9NTK5 396 aaKnown RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 DLGAP4Q9Y2H0 992 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 A0A096LPI6 279 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 ISPDA4D126 451 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 CLDN24A6NM45 220 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 PGLSO95336 258 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 IGLV3-27P01718 113 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 SLC6A4P31645 630 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 LIPAP38571 399 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 NFE2Q16621 373 aaPredicted RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 ZNF551Q7Z340 670 aaPredicted RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 TSPYL5Q86VY4 417 aaPredicted RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 TXNDC15Q96J42 360 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 TSSK3Q96PN8 268 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 TNKS2Q9H2K2 1166 aa23.02■■□□□ 1.28
TSKU-201ENST00000333090 TLR8Q9NR97 1041 aaKnown RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 SAMHD1Q9Y3Z3 626 aaKnown RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 ZFP37Q9Y6Q3 630 aaPredicted RBP23.02■■□□□ 1.28
TSKU-201ENST00000333090 CBX4O00257 560 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 MANBAO00462 879 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 AIREO43918 545 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 RFPL2O75678 378 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 KCNK2O95069 426 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 CCNDBP1O95273 360 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 S100A1P23297 94 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 CTGFP29279 349 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 DNAJA1P31689 397 aaKnown RBP23.02■■□□□ 1.27
TSKU-201ENST00000333090 ARPP19P56211 112 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 RPS14P62263 151 aaKnown RBP23.02■■□□□ 1.27
TSKU-201ENST00000333090 RPS24P62847 133 aaKnown RBP23.02■■□□□ 1.27
TSKU-201ENST00000333090 ABHD18Q0P651 414 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 FADDQ13158 208 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 LRIF1Q5T3J3 769 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 KIAA1614Q5VZ46 1190 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 TRIM46Q7Z4K8 759 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 VTCN1Q7Z7D3 282 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 GALNT13Q8IUC8 556 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 STK40Q8N2I9 435 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 CARNMT1Q8N4J0 409 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 ADGRE3Q9BY15 652 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 ITPAQ9BY32 194 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 FAM126AQ9BYI3 521 aaPredicted RBP23.02■■□□□ 1.27
TSKU-201ENST00000333090 SPATA7Q9P0W8 599 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 KLHL3Q9UH77 587 aa23.02■■□□□ 1.27
TSKU-201ENST00000333090 GREB1Q4ZG55 1949 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 GLUD1P00367 558 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 C1QCP02747 245 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 DBTP11182 482 aaKnown RBP23.01■■□□□ 1.27
TSKU-201ENST00000333090 HOXB6P17509 224 aaKnown RBP23.01■■□□□ 1.27
TSKU-201ENST00000333090 TCEA1P23193 301 aaKnown RBP23.01■■□□□ 1.27
TSKU-201ENST00000333090 CREMQ03060 361 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 CPSF6Q16630 551 aaKnown RBP eCLIP23.01■■□□□ 1.27
TSKU-201ENST00000333090 SLC22A15Q8IZD6 547 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 C2orf69Q8N8R5 385 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 FAM83FQ8NEG4 500 aaPredicted RBP23.01■■□□□ 1.27
TSKU-201ENST00000333090 CAPSLQ8WWF8 208 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 FUBP3Q96I24 572 aaKnown RBP eCLIP23.01■■□□□ 1.27
TSKU-201ENST00000333090 CD244Q9BZW8 370 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 MMP27Q9H306 513 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 PCDHB5Q9Y5E4 795 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 WNT9AO14904 365 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 NUAK1O60285 661 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 PCDHGA12O60330 932 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 EIF2S1P05198 315 aaKnown RBP23.01■■□□□ 1.27
TSKU-201ENST00000333090 FPR1P21462 350 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 NR4A2P43354 598 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 VLDLRP98155 873 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 ZNF280BQ86YH2 543 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 SLC38A4Q969I6 547 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 BOCQ9BWV1 1114 aa23.01■■□□□ 1.27
TSKU-201ENST00000333090 AGAP5A6NIR3 686 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms