RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 SATB2Q9UPW6 733 aa9.5□□□□□ -0.89
SYN3-201ENST00000332840 ARL2BPQ9Y2Y0 163 aa9.5□□□□□ -0.89
SYN3-201ENST00000332840 PRKAB1Q9Y478 270 aa9.5□□□□□ -0.89
SYN3-201ENST00000332840 PLEKHM1Q9Y4G2 1056 aa9.5□□□□□ -0.89
SYN3-201ENST00000332840 PCDHGA7Q9Y5G6 932 aa9.5□□□□□ -0.89
SYN3-201ENST00000332840 ST14Q9Y5Y6 855 aa9.5□□□□□ -0.89
SYN3-201ENST00000332840 KIF26BQ2KJY2 2108 aa9.5□□□□□ -0.89
SYN3-201ENST00000332840 COL6A6A6NMZ7 2263 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 IGHV1OR21-1A0A087WYE8 117 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 CCDC189A1A4V9 331 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 LILRA5A6NI73 299 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 TARM1B6A8C7 271 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 E5RI56 91 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 F8W8V4 182 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 QSOX1O00391 747 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 PPM1DO15297 605 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 B4GAT1O43505 415 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 OR1I1O60431 355 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 SNNO75324 88 aaPredicted RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 MTX2O75431 263 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 GSTM1P09488 218 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 ZNF37AP17032 561 aaPredicted RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 XRCC1P18887 633 aaPredicted RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 UGT1A6P19224 532 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 CHRM3P20309 590 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 UGT1A1P22309 533 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 UGT1A4P22310 534 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 ATP5F1P24539 256 aaPredicted RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 ITPKBP27987 946 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 CD1CP29017 333 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 UGT1A3P35503 534 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 UGT1A5P35504 534 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 GLRBP48167 497 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 SLC1A6P48664 564 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 PPM1FP49593 454 aaPredicted RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 ATP6V0D1P61421 351 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 OCRLQ01968 901 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 GSTM4Q03013 218 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 TECRLQ5HYJ1 363 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 CTSL3PQ5NE16 218 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 PHF19Q5T6S3 580 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 TMEM164Q5U3C3 297 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 LIPMQ5VYY2 423 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 PTRHD1Q6GMV3 140 aaKnown RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 CGB2Q6NT52 195 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 WDR74Q6RFH5 385 aaPredicted RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 TMEM207Q6UWW9 146 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 ABRAXAS1Q6UWZ7 409 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 CRLF3Q8IUI8 442 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 ZNF547Q8IVP9 402 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 NXPE1Q8N323 547 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 TMEM151AQ8N4L1 468 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 OR4D9Q8NGE8 314 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 PATE1Q8WXA2 126 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 KCNJ9Q92806 393 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 CCDC126Q96EE4 140 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 COPS8Q99627 209 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 GPR21Q99679 349 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 DPH1Q9BZG8 443 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 ASCL3Q9NQ33 180 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 OXSMQ9NWU1 459 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 KLHL14Q9P2G3 628 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 CPSF2Q9P2I0 782 aaKnown RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 XPR1Q9UBH6 696 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 TRMT6Q9UJA5 497 aaKnown RBP9.49□□□□□ -0.89
SYN3-201ENST00000332840 LOXL2Q9Y4K0 774 aa9.49□□□□□ -0.89
SYN3-201ENST00000332840 PRR19A6NJB7 356 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 TMEM114B3SHH9 223 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 PYCARD-AS1I3L0S3 204 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 TK2O00142 265 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 NIPSNAP2O75323 286 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 TNFSF15O95150 251 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 VIPP01282 170 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 SBK3P0C264 359 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 CD1DP15813 335 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 TFEBP19484 476 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 CD82P27701 267 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 NSG1P42857 185 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 OR1D5P58170 312 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 DNAJB13P59910 316 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 ABCE1P61221 599 aaKnown RBP9.48□□□□□ -0.89
SYN3-201ENST00000332840 UBE2IP63279 158 aaKnown RBP9.48□□□□□ -0.89
SYN3-201ENST00000332840 BCL7AQ4VC05 210 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 KHDC1Q4VXA5 237 aaKnown RBP9.48□□□□□ -0.89
SYN3-201ENST00000332840 BROXQ5VW32 411 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 TMEM71Q6P5X7 295 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 KLHL35Q6PF15 583 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 FOXR1Q6PIV2 292 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 PAQR3Q6TCH7 311 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 C6orf89Q6UWU4 347 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 ZCCHC23Q6ZST2 131 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 B3GNT8Q7Z7M8 397 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 PLXDC1Q8IUK5 500 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 SLC22A9Q8IVM8 553 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 SFTPA2Q8IWL1 248 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 SPATA6LQ8N4H0 392 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 RASGEF1AQ8N9B8 481 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 AGBL5Q8NDL9 886 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 OR6Y1Q8NGX8 325 aa9.48□□□□□ -0.89
SYN3-201ENST00000332840 RHEBL1Q8TAI7 183 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms