RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 EPHB3P54753 998 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 YBX1P67809 324 aaKnown RBP13.19□□□□□ -0.3
RIPK4-201ENST00000332512 APOFQ13790 326 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 DSC3Q14574 896 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 NCF4Q15080 339 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 MFSD4BQ5TF39 518 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 KANK2Q63ZY3 851 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 USP45Q70EL2 814 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
RIPK4-201ENST00000332512 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 LGALS12Q96DT0 336 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 PYURFQ96I23 114 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 HSH2DQ96JZ2 352 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 HSFX1Q9UBD0 423 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 KRBA1A5PL33 1030 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 ERAL1O75616 437 aaKnown RBP13.19□□□□□ -0.3
RIPK4-201ENST00000332512 PAPSS2O95340 614 aaPredicted RBP13.19□□□□□ -0.3
RIPK4-201ENST00000332512 CATP04040 527 aaKnown RBP13.19□□□□□ -0.3
RIPK4-201ENST00000332512 TSPAN19P0C672 248 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 GABRR2P28476 465 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 ST8SIA6P61647 398 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 KLHL17Q6TDP4 642 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 TRIM69Q86WT6 500 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 ZFAND4Q86XD8 727 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 PELI3Q8N2H9 469 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 PGBD5Q8N414 524 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 TBC1D15Q8TC07 691 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.32e-7■■■■■ 52.6
RIPK4-201ENST00000332512 TP53INP1Q96A56 240 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 COL26A1Q96A83 441 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 DYRK4Q9NR20 520 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 FLRT1Q9NZU1 646 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 PCDHB8Q9UN66 801 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 PCDHGA11Q9Y5H2 935 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 CORINQ9Y5Q5 1042 aa13.19□□□□□ -0.3
RIPK4-201ENST00000332512 KIAA1217Q5T5P2 1943 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 TGFB1P01137 390 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 FUCA1P04066 466 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 PORP16435 677 aaPredicted RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 HTR1EP28566 365 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 PIGAP37287 484 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 MAGEA12P43365 314 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 MAPKAPK2P49137 400 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 CDH4P55283 916 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 SRP54P61011 504 aaKnown RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 SEMA3BQ13214 749 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 RCAN2Q14206 197 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 PYDC2Q56P42 97 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 RAVER1Q8IY67 606 aaKnown RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 ADGRG2Q8IZP9 1017 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 CLECL1Q8IZS7 167 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 SVOPLQ8N434 492 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 KBTBD8Q8NFY9 601 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 L3HYPDHQ96EM0 354 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 OTUB1Q96FW1 271 aaPredicted RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 KLHL1Q9NR64 748 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 DNAJC11Q9NVH1 559 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 CD300AQ9UGN4 299 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 NRAPQ86VF7 1730 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 EEDO75530 441 aaKnown RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 URODP06132 367 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 HPCAL1P37235 193 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 TRIQKQ629K1 86 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 TMEM53Q6P2H8 277 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 TRIM48Q8IWZ4 208 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 LMNTD1Q8N9Z9 388 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 MDGA1Q8NFP4 955 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 XAGE5Q8WWM1 108 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 WBP11Q9Y2W2 641 aaKnown RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 PCDHB1Q9Y5F3 818 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 GMEB1Q9Y692 573 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 CEP290O15078 2479 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 M0QX08 132 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 DUSP11O75319 330 aaKnown RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 PSIP1O75475 530 aaKnown RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 TCF3P15923 654 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 DCTP40126 519 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 MEF2AQ02078 507 aaPredicted RBP13.18□□□□□ -0.3
RIPK4-201ENST00000332512 C2orf80Q0P641 193 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 CNTN1Q12860 1018 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 GRB14Q14449 540 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 FAM131AQ6UXB0 335 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 RHEBL1Q8TAI7 183 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 SCAMP4Q969E2 229 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 C8orf4Q9NR00 106 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 CFAP97Q9P2B7 532 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 FZD4Q9ULV1 537 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 PCDHB14Q9Y5E9 798 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 CPQQ9Y646 472 aa13.18□□□□□ -0.3
RIPK4-201ENST00000332512 DYTNA2CJ06 578 aa13.17□□□□□ -0.3
RIPK4-201ENST00000332512 MANBAO00462 879 aa13.17□□□□□ -0.3
RIPK4-201ENST00000332512 PFKLP17858 780 aa13.17□□□□□ -0.3
RIPK4-201ENST00000332512 NR4A2P43354 598 aa13.17□□□□□ -0.3
RIPK4-201ENST00000332512 ELP6Q0PNE2 266 aa13.17□□□□□ -0.3
RIPK4-201ENST00000332512 TPRG1LQ5T0D9 272 aa13.17□□□□□ -0.3
RIPK4-201ENST00000332512 SPRYD7Q5W111 196 aa13.17□□□□□ -0.3
RIPK4-201ENST00000332512 C1orf52Q8N6N3 182 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms