RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RPL5P46777 297 aaKnown RBP15.47■□□□□ 0.07
PDGFB-201ENST00000331163 AMZ1Q400G9 498 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 ZNF678Q5SXM1 525 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 LYPLAL1Q5VWZ2 237 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 CNTN4Q8IWV2 1026 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 TRAM1L1Q8N609 369 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 DLG3Q92796 817 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 PARVBQ9HBI1 364 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 DOCK4Q8N1I0 1966 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 CKAP5Q14008 2032 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 TGFB1P01137 390 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 NTRK1P04629 796 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 IMPDH1P20839 514 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 DRD3P35462 400 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 LCP2Q13094 533 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 TIGD2Q4W5G0 525 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 DPPA4Q7L190 304 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 CLYBLQ8N0X4 340 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 LRIG1Q96JA1 1093 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 Q9H521 79 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 PDE10AQ9Y233 779 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 NYNRINQ9P2P1 1898 aaKnown RBP15.46■□□□□ 0.07
PDGFB-201ENST00000331163 ADAM23O75077 832 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 SEC24DO94855 1032 aaPredicted RBP15.46■□□□□ 0.07
PDGFB-201ENST00000331163 VARSP26640 1264 aaKnown RBP15.46■□□□□ 0.07
PDGFB-201ENST00000331163 PRKAA2P54646 552 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 DIO3P55073 304 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 YBX1P67809 324 aaKnown RBP15.46■□□□□ 0.07
PDGFB-201ENST00000331163 CDK3Q00526 305 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 CYP4F3Q08477 520 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 FLOT2Q14254 428 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 C16orf72Q14CZ0 275 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 DNAJB14Q8TBM8 379 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 RCN3Q96D15 328 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 PLEKHG4BQ96PX9 1271 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 DERL2Q9GZP9 239 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 TFB2MQ9H5Q4 396 aaKnown RBP15.46■□□□□ 0.07
PDGFB-201ENST00000331163 STOX2Q9P2F5 926 aaPredicted RBP15.46■□□□□ 0.07
PDGFB-201ENST00000331163 SLC23A2Q9UGH3 650 aa15.46■□□□□ 0.07
PDGFB-201ENST00000331163 CPSF4O95639 269 aaKnown RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CD1EP15812 388 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 IDSP22304 550 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 PSMB5P28074 263 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 PSMD7P51665 324 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 MAPK10P53779 464 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 SMAD4Q13485 552 aaKnown RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 MLF2Q15773 248 aaPredicted RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 VPS26BQ4G0F5 336 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 GOLGA7Q7Z5G4 137 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 PPWD1Q96BP3 646 aaKnown RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 HSPA12BQ96MM6 686 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CCT7Q99832 543 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 C1QTNF1Q9BXJ1 281 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 SSU72Q9NP77 194 aaKnown RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 UBAP1Q9NZ09 502 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CEP250Q9BV73 2442 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 SMIM31A0A1B0GVY4 71 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 KANSL1LA0AUZ9 987 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 HK3P52790 923 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CAPRIN1Q14444 709 aaKnown RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 PNCKQ6P2M8 343 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 AGTRAPQ6RW13 159 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CYP2R1Q6VVX0 501 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 SH2D5Q6ZV89 423 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CEP68Q76N32 757 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CDRT15Q96T59 188 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 TRIM39Q9HCM9 518 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CLCA2Q9UQC9 943 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 KCNE2Q9Y6J6 123 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 MIA3Q5JRA6 1907 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 TCF20Q9UGU0 1960 aaKnown RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 STX16-NPEPL1H3BU86 382 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 PDGFBP01127 241 aaPredicted RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 TFAP2AP05549 437 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 DHRS4L1P0CG22 281 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CSNK1EP49674 416 aaKnown RBP15.45■□□□□ 0.06
PDGFB-201ENST00000331163 CLCN7P51798 805 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 PLA2G16P53816 162 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 ADPRHP54922 357 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 RALGDSQ12967 914 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 GRB7Q14451 532 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 TYSND1Q2T9J0 566 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 ALG1LQ6GMV1 187 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 Q6ZSR6 202 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 SYVN1Q86TM6 617 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 HORMAD1Q86X24 394 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 PDXPQ96GD0 296 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 SORT1Q99523 831 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 TMEM168Q9H0V1 697 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 PATJQ8NI35 1801 aa15.45■□□□□ 0.06
PDGFB-201ENST00000331163 H7BY64 318 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 VILLO15195 856 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 SRSF5Q13243 272 aaKnown RBP15.44■□□□□ 0.06
PDGFB-201ENST00000331163 METTL25Q8N6Q8 603 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 CNDP1Q96KN2 507 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 C7orf26Q96N11 449 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 PRAP1Q96NZ9 151 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 TBCDQ9BTW9 1192 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 SGK2Q9HBY8 427 aa15.44■□□□□ 0.06
PDGFB-201ENST00000331163 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms