RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 BPIFB6Q8NFQ5 453 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 CLHC1Q8NHS4 586 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 GINS4Q9BRT9 223 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 NUAK2Q9H093 628 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 COMMD3-BMI1R4GMX3 469 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 RIIAD1A6NNX1 92 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 DLX3O60479 287 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ALPPP05187 535 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 C5AR1P21730 350 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 NCEH1Q6PIU2 408 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 KLHDC7BQ96G42 594 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 ABCG8Q9H221 673 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 KLHL1Q9NR64 748 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 POLE3Q9NRF9 147 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 C19orf25Q9UFG5 118 aaPredicted RBP11.16□□□□□ -0.62
COL4A5-201ENST00000328300 FBXW2Q9UKT8 454 aa11.16□□□□□ -0.62
COL4A5-201ENST00000328300 GRIK2Q13002 908 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 RABEPKQ7Z6M1 372 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 FAM98AQ8NCA5 519 aaKnown RBP11.15□□□□□ -0.62
COL4A5-201ENST00000328300 ZHX1-C8orf76Q96EF9 292 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 OR2M4Q96R27 311 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 SSR3Q9UNL2 185 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 DGKBQ9Y6T7 804 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 XKRYO14609 159 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 HCRTO43612 131 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 THRBP10828 461 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 CDH1P12830 882 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 GSTM3P21266 225 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.62
COL4A5-201ENST00000328300 DPP6P42658 865 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 CLLU1OSQ5K130 101 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 PAOXQ6QHF9 649 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 RNF44Q7L0R7 432 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 GOLGA7Q7Z5G4 137 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 CPNE8Q86YQ8 564 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 COX18Q8N8Q8 333 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 PDPRQ8NCN5 879 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 OR5K1Q8NHB7 308 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 ISG20Q96AZ6 181 aaKnown RBP11.15□□□□□ -0.62
COL4A5-201ENST00000328300 WDR92Q96MX6 357 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 PELOQ9BRX2 385 aaKnown RBP11.15□□□□□ -0.62
COL4A5-201ENST00000328300 GRIP2Q9C0E4 1043 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 CSNK1G1Q9HCP0 422 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 MS4A12Q9NXJ0 267 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 PDP1Q9P0J1 537 aaPredicted RBP11.15□□□□□ -0.62
COL4A5-201ENST00000328300 CACNG4Q9UBN1 327 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 MAN2B2Q9Y2E5 1009 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 UGT1A9O60656 530 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 UGT1A6P19224 532 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 UGT1A1P22309 533 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 UGT1A4P22310 534 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 RPS3P23396 243 aaKnown RBP eCLIP11.15□□□□□ -0.624e-6■■■■□ 23
COL4A5-201ENST00000328300 MAT2AP31153 395 aaKnown RBP11.15□□□□□ -0.62
COL4A5-201ENST00000328300 UGT1A3P35503 534 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 SMU1Q2TAY7 513 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 AGTRAPQ6RW13 159 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 TMEM40Q8WWA1 233 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 UGT1A7Q9HAW7 530 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 UGT1A10Q9HAW8 530 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 UGT1A8Q9HAW9 530 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 GPRC5BQ9NZH0 403 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 P2RX2Q9UBL9 471 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 FADS3Q9Y5Q0 445 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 GJB5O95377 273 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 EDN1P05305 212 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 HOXD8P13378 290 aaPredicted RBP11.15□□□□□ -0.62
COL4A5-201ENST00000328300 ACRV1P26436 265 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 ITPKBP27987 946 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 CCR10P46092 362 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 WDR4P57081 412 aaKnown RBP11.15□□□□□ -0.62
COL4A5-201ENST00000328300 DUOXA1Q1HG43 343 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 EPGNQ6UW88 154 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 FRMD7Q6ZUT3 714 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 TMEM135Q86UB9 458 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 ZZZ3Q8IYH5 903 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 SLC9A6Q92581 669 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 MRGPRX2Q96LB1 330 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 HAPLN2Q9GZV7 340 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 OARD1Q9Y530 152 aa11.15□□□□□ -0.62
COL4A5-201ENST00000328300 MMP20O60882 483 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF217O75362 1048 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 MATN4O95460 622 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 CAPGP40121 348 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 IRF9Q00978 393 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF460Q14592 562 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 DHCR24Q15392 516 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 ZBTB6Q15916 424 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 FAM174BQ3ZCQ3 159 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 UNC5DQ6UXZ4 953 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF671Q8TAW3 534 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 EEF1AKMT1Q8WVE0 214 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 GLYATL1Q969I3 302 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 ASB9Q96DX5 294 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 CASD1Q96PB1 797 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 NELL2Q99435 816 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 ACTL8Q9H568 366 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 EGFL7Q9UHF1 273 aa11.15□□□□□ -0.63
COL4A5-201ENST00000328300 TLX3O43711 291 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-201ENST00000328300 SCN2BO60939 215 aa11.14□□□□□ -0.63
COL4A5-201ENST00000328300 GRIA1P42261 906 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms