RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 RTL3Q8N8U3 475 aaKnown RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 OR4L1Q8NH43 312 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 GGHQ92820 318 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 FAM120BQ96EK7 910 aaKnown RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 MAP6Q96JE9 813 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 CEP295NLQ96MC4 621 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 ZBTB18Q99592 522 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 GPR21Q99679 349 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 IL1RAPQ9NPH3 570 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 PLCXD1Q9NUJ7 323 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 TAS2R13Q9NYV9 303 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 UXTQ9UBK9 157 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 UBA2Q9UBT2 640 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 NUFIP1Q9UHK0 495 aaKnown RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 MUTYHQ9UIF7 546 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 GINS2Q9Y248 185 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 AP3M1Q9Y2T2 418 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 DOCK4Q8N1I0 1966 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 LOC285095A0A1B0GVY8 99 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 J3KR12 359 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 PER2O15055 1255 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 KIAA0513O60268 411 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 PTHP01270 115 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 MYCLP1P12525 358 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 SLC2A4P14672 509 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 SOX6P35712 828 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 TUFMP49411 452 aaKnown RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 FCHO2Q0JRZ9 810 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 ARHGEF6Q15052 776 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 ARMCX4Q5H9R4 360 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 KIAA1841Q6NSI8 718 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 FAHD1Q6P587 224 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 NIM1KQ8IY84 436 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 DNAJC22Q8N4W6 341 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 KRTCAP2Q8N6L1 136 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 FLCNQ8NFG4 579 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 POP5Q969H6 163 aaKnown RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 TADA1Q96BN2 335 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 RMDN1Q96DB5 314 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 HRASLS5Q96KN8 279 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 MCCC1Q96RQ3 725 aaPredicted RBP12.47□□□□□ -0.41
CCDC60-201ENST00000327554 RAD9AQ99638 391 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 SP110Q9HB58 689 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 AMBNQ9NP70 447 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 TOR4AQ9NXH8 423 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 KCNN3Q9UGI6 736 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 HACL1Q9UJ83 578 aa12.47□□□□□ -0.41
CCDC60-201ENST00000327554 A0A075B6Q4 140 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 C12orf71A8MTZ7 269 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 hCG_2039718K7EN88 272 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 CDK2AP1O14519 115 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 OR7A17O14581 309 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 POLR1CO15160 346 aaPredicted RBP12.46□□□□□ -0.41
CCDC60-201ENST00000327554 TEX28O15482 410 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ZNF780AO75290 641 aaPredicted RBP12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ZNF682O95780 498 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 MYCP01106 439 aaPredicted RBP12.46□□□□□ -0.41
CCDC60-201ENST00000327554 VIPP01282 170 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 CNPP09543 421 aaKnown RBP12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ZNF286BP0CG31 522 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 KCNE1P15382 129 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 HTR7P34969 479 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 TIE1P35590 1138 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 NUDT1P36639 197 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 RENBPP51606 427 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ARHGAP1Q07960 439 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 BAK1Q16611 211 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 FBXO43Q4G163 708 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ARMC4Q5T2S8 1044 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 MLIPQ5VWP3 458 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 Q6ZPB1 254 aaPredicted RBP12.46□□□□□ -0.41
CCDC60-201ENST00000327554 P3H2Q8IVL5 708 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ATG16L2Q8NAA4 619 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ST13P5Q8NFI4 369 aaPredicted RBP12.46□□□□□ -0.41
CCDC60-201ENST00000327554 OR4F6Q8NGB9 312 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ARRDC2Q8TBH0 407 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 BLOC1S5Q8TDH9 187 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 MYDGFQ969H8 173 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 NACC2Q96BF6 587 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ZNF717Q9BY31 904 aaPredicted RBP12.46□□□□□ -0.41
CCDC60-201ENST00000327554 MMP28Q9H239 520 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 TNKS2Q9H2K2 1166 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 AGO3Q9H9G7 860 aaKnown RBP12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ATP13A2Q9NQ11 1180 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 ASAH2Q9NR71 780 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 KIF17Q9P2E2 1029 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 PCDHB5Q9Y5E4 795 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 V9GYH0 126 aa12.46□□□□□ -0.41
CCDC60-201ENST00000327554 PCNTO95613 3336 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 TFECO14948 347 aaPredicted RBP12.46□□□□□ -0.42
CCDC60-201ENST00000327554 IRAK2O43187 625 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 CA12O43570 354 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 SEMG1P04279 462 aa12.46□□□□□ -0.42
CCDC60-201ENST00000327554 PRIM2P49643 509 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms