RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CSF2RAP15509 400 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 PTPN6P29350 595 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 CXCR4P61073 352 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 LRRC70Q7Z2Q7 622 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 CHPFQ8IZ52 775 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 WBP2Q969T9 261 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 NCLNQ969V3 563 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 FUNDC2Q9BWH2 189 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 CRLS1Q9UJA2 301 aa19.39■□□□□ 0.69
SOX2-201ENST00000325404 C1orf232A0A0U1RR37 186 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 HS6ST1O60243 411 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 MRPS14O60783 128 aaKnown RBP19.38■□□□□ 0.69
SOX2-201ENST00000325404 E2F6O75461 281 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 SERPINA1P01009 418 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 ITGB6P18564 788 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 CA5AP35218 305 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 SPAM1P38567 509 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 BCL2L1Q07817 233 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 BOP1Q14137 746 aaKnown RBP19.38■□□□□ 0.69
SOX2-201ENST00000325404 RETSATQ6NUM9 610 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 SLC16A12Q6ZSM3 486 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 DET1Q7L5Y6 550 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 NXPE1Q8N323 547 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 BEND7Q8N7W2 519 aaPredicted RBP19.38■□□□□ 0.69
SOX2-201ENST00000325404 NETO1Q8TDF5 533 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 ZNF347Q96SE7 839 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 RC3H2Q9HBD1 1191 aaKnown RBP19.38■□□□□ 0.69
SOX2-201ENST00000325404 SAMD4AQ9UPU9 718 aaKnown RBP19.38■□□□□ 0.69
SOX2-201ENST00000325404 ERGIC3Q9Y282 383 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 PLXNA4Q9HCM2 1894 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 EFCAB14O75071 495 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 BCAS1O75363 584 aaPredicted RBP19.38■□□□□ 0.69
SOX2-201ENST00000325404 CCNDBP1O95273 360 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 BPIP17213 487 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 PHC1P78364 1004 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 DPY19L1Q2PZI1 675 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 CRTC3Q6UUV7 619 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 TMEM179BQ7Z7N9 219 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 METTL3Q86U44 580 aaKnown RBP19.38■□□□□ 0.69
SOX2-201ENST00000325404 HS3ST5Q8IZT8 346 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 SLC15A4Q8N697 577 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 CLDN19Q8N6F1 224 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 PIK3C3Q8NEB9 887 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 ZNF461Q8TAF7 563 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 CMTM7Q96FZ5 175 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 LYSMD1Q96S90 227 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 ACPTQ9BZG2 426 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 PARVBQ9HBI1 364 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 TSR3Q9UJK0 312 aaKnown RBP19.38■□□□□ 0.69
SOX2-201ENST00000325404 UTS2RQ9UKP6 389 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 SNX6Q9UNH7 406 aa19.38■□□□□ 0.69
SOX2-201ENST00000325404 CFAP99D6REC4 459 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 OCM2P0CE71 109 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 OCMP0CE72 109 aaPredicted RBP19.37■□□□□ 0.69
SOX2-201ENST00000325404 IRF1P10914 325 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 JUNDP17535 347 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 LAG3P18627 525 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 ITGB8P26012 769 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 NSG1P42857 185 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 VAC14Q08AM6 782 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 LAPTM5Q13571 262 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 KEAP1Q14145 624 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 MAGEB10Q96LZ2 347 aaPredicted RBP19.37■□□□□ 0.69
SOX2-201ENST00000325404 C2orf49Q9BVC5 232 aaPredicted RBP19.37■□□□□ 0.69
SOX2-201ENST00000325404 HERC2P3Q9BVR0 1158 aa19.37■□□□□ 0.69
SOX2-201ENST00000325404 CSKP41240 450 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 WDR5P61964 334 aaKnown RBP19.36■□□□□ 0.69
SOX2-201ENST00000325404 ABRQ12979 859 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 CDK5R2Q13319 367 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 CHRNA6Q15825 494 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 CPZQ66K79 652 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 TPGS2Q68CL5 300 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 GALNT18Q6P9A2 607 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 SERPINA11Q86U17 422 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 CENPSQ8N2Z9 138 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 SNRNP27Q8WVK2 155 aaKnown RBP19.36■□□□□ 0.69
SOX2-201ENST00000325404 COQ6Q9Y2Z9 468 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 KIAA0100Q14667 2235 aaKnown RBP19.36■□□□□ 0.69
SOX2-201ENST00000325404 LTBP2Q14767 1821 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 TRIM43BA6NCK2 446 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 ZNF99A8MXY4 864 aaPredicted RBP19.36■□□□□ 0.69
SOX2-201ENST00000325404 BCKDKO14874 412 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 ZSCAN9O15535 394 aaPredicted RBP19.36■□□□□ 0.69
SOX2-201ENST00000325404 ABLIM3O94929 683 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 SEC24AO95486 1093 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 UGT2B4P06133 528 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 EPORP19235 508 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 HNF1BP35680 557 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 TRPC1P48995 793 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 NR1D2Q14995 579 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 GTDC1Q4AE62 458 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 SGO1Q5FBB7 561 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 PHACTR4Q8IZ21 702 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 PARP8Q8N3A8 854 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 ABHD11Q8NFV4 315 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 SGCDQ92629 289 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 TRIM43Q96BQ3 446 aaPredicted RBP19.36■□□□□ 0.69
SOX2-201ENST00000325404 VMP1Q96GC9 406 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 SLC6A13Q9NSD5 602 aa19.36■□□□□ 0.69
SOX2-201ENST00000325404 SPG21Q9NZD8 308 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms