RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 GEMIN4P57678 1058 aaKnown RBP2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 SIRPAP78324 504 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 CXCL9Q07325 125 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 HERC3Q15034 1050 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 LCN1P1Q5VSP4 162 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 FIGLAQ6QHK4 219 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 MMS22LQ6ZRQ5 1243 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 CHST9Q7L1S5 443 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 G2E3Q7L622 706 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 NUDT13Q86X67 352 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 CFAP206Q8IYR0 622 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 ARHGAP24Q8N264 748 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 OR13C3Q8NGS6 347 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 C11orf45Q8TAV5 145 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 APOBEC4Q8WW27 367 aaKnown RBP2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 TOMM40LQ969M1 308 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 MPP4Q96JB8 637 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 NECTIN4Q96NY8 510 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 RAD9AQ99638 391 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 NKX3-1Q99801 234 aaPredicted RBP2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 SRSF8Q9BRL6 282 aaKnown RBP2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 URM1Q9BTM9 101 aaKnown RBP2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 KCNK15Q9H427 330 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 ZHX3Q9H4I2 956 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 SERINC1Q9NRX5 453 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 SWAP70Q9UH65 585 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 DAPK2Q9UIK4 370 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 ZNF510Q9Y2H8 683 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 TRIM17Q9Y577 477 aa2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 ZNF644Q9H582 1327 aaPredicted RBP2.32□□□□□ -2.04
CBX3P1-201ENST00000325243 C2orf81A6NN90 581 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 ENO4A6NNW6 628 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 XRCC3O43542 346 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 HSPA8P11142 646 aaKnown RBP2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 CHMP24386 653 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 RPL21P46778 160 aaKnown RBP2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 TAF10Q12962 218 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 MTF1Q14872 753 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 ODF4Q2M2E3 257 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 ELFN2Q5R3F8 820 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 JAKMIP3Q5VZ66 844 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 FAM198BQ6UWH4 519 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 IKBIPQ70UQ0 350 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 RTN4RL2Q86UN3 420 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 ZFAND4Q86XD8 727 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 METTL4Q8N3J2 472 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 WDTC1Q8N5D0 677 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 OR11H4Q8NGC9 324 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 SCFD2Q8WU76 684 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 ZNF577Q9BSK1 485 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 MIS12Q9H081 205 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 HRH4Q9H3N8 390 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 TUBB1Q9H4B7 451 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 ZNF107Q9UII5 783 aaPredicted RBP2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 HACL1Q9UJ83 578 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 TSPAN16Q9UKR8 245 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 WIPI2Q9Y4P8 454 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 PCDH11YQ9BZA8 1340 aa2.31□□□□□ -2.04
CBX3P1-201ENST00000325243 LRRC72A6NJI9 287 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 A8MXK9 166 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 H0YAE9 185 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 TFECO14948 347 aaPredicted RBP2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 GPRIN2O60269 458 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 CEACAM4O75871 244 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 TRUB2O95900 331 aaKnown RBP2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 CDH3P22223 829 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 TM4SF1P30408 202 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 ACSL1P33121 698 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 MAN1A1P33908 653 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 ARSEP51690 589 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 TPD52P55327 224 aaPredicted RBP2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 GCNT1Q02742 428 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 SNX30Q5VWJ9 437 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 NOTUMQ6P988 496 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 GDPGP1Q6ZNW5 385 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 TMPRSS11FQ6ZWK6 438 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 HAUS6Q7Z4H7 955 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 LDB1Q86U70 411 aaPredicted RBP2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 PHC2Q8IXK0 858 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 CDK20Q8IZL9 346 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 FAM9BQ8IZU0 186 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 NAXEQ8NCW5 288 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 TYMSOSQ8TAI1 123 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 NPRL2Q8WTW4 380 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 CHPT1Q8WUD6 406 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 USP6NLQ92738 828 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 SKA1Q96BD8 255 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 DHX58Q96C10 678 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 PPM1MQ96MI6 270 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 LGMNQ99538 433 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 OVOL2Q9BRP0 275 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 FNDC11Q9BVV2 318 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 ITPAQ9BY32 194 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 SPATC1LQ9H0A9 340 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 FAM49AQ9H0Q0 323 aaPredicted RBP2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 STUB1Q9UNE7 303 aa2.3□□□□□ -2.04
CBX3P1-201ENST00000325243 A0A087WUV0 522 aaPredicted RBP2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 J3KRW8 73 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 PRAMEF11O60813 436 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms