RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 LAYNQ6UX15 382 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 RNF148Q8N7C7 305 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 PROKR1Q8TCW9 393 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 ATL1Q8WXF7 558 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 NEIL2Q969S2 332 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 VPS33AQ96AX1 596 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 BMFQ96LC9 184 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 TACO1Q9BSH4 297 aaKnown RBP17.86■□□□□ 0.45
USP39-201ENST00000323701 SLC29A3Q9BZD2 475 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 BTBD1Q9H0C5 482 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 WDR41Q9HAD4 459 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 MOSPD1Q9UJG1 213 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 POLR3HQ9Y535 204 aaPredicted RBP17.86■□□□□ 0.45
USP39-201ENST00000323701 ASPDHA6ND91 283 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 SLC2A4P14672 509 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 NPPBP16860 134 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 VARSP26640 1264 aaKnown RBP17.86■□□□□ 0.45
USP39-201ENST00000323701 MSX2P35548 267 aaPredicted RBP17.86■□□□□ 0.45
USP39-201ENST00000323701 CLCNKAP51800 687 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 RPL38P63173 70 aaKnown RBP17.86■□□□□ 0.45
USP39-201ENST00000323701 RPS6KA2Q15349 733 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 LEXMQ3ZCV2 418 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 PYCR3Q53H96 274 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 XKR6Q5GH73 641 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 IL23RQ5VWK5 629 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 BLOC1S3Q6QNY0 202 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 KLHDC8AQ8IYD2 350 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 CDRT15Q96T59 188 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 OSGEPL1Q9H4B0 414 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 MAP10Q9P2G4 905 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 L3MBTL1Q9Y468 752 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 PCDHGA7Q9Y5G6 932 aa17.86■□□□□ 0.45
USP39-201ENST00000323701 ANKRD28O15084 1053 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 NRP2O60462 931 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 EZRP15311 586 aaKnown RBP17.85■□□□□ 0.45
USP39-201ENST00000323701 MAPK9P45984 424 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 IRF8Q02556 426 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 PLOD1Q02809 727 aaPredicted RBP17.85■□□□□ 0.45
USP39-201ENST00000323701 EMX2Q04743 252 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 RPA4Q13156 261 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 FZD5Q13467 585 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 PTGR1Q14914 329 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 WASHC2DQ5SRD0 308 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 SELENOMQ8WWX9 145 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 SLC25A23Q9BV35 468 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 ITM2CQ9NQX7 267 aa17.85■□□□□ 0.45
USP39-201ENST00000323701 TDRKHQ9Y2W6 561 aaKnown RBP17.85■□□□□ 0.45
USP39-201ENST00000323701 PRAMEF33A0A0G2JMD5 474 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 KRBA1A5PL33 1030 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 CLGNO14967 610 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 JUPP14923 745 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 ART3Q13508 389 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 CEACAM7Q14002 265 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 KIAA0040Q15053 153 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 MMEL1Q495T6 779 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 CATSPEREQ5SY80 951 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 ANO7Q6IWH7 933 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 RNF165Q6ZSG1 346 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 ARHGAP24Q8N264 748 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 PDXPQ96GD0 296 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 MRPL1Q9BYD6 325 aaKnown RBP17.84■□□□□ 0.45
USP39-201ENST00000323701 ELOVL6Q9H5J4 265 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 C6orf106Q9H6K1 298 aaPredicted RBP17.84■□□□□ 0.45
USP39-201ENST00000323701 PFDN4Q9NQP4 134 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 DUSP12Q9UNI6 340 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 PRR19A6NJB7 356 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 H0Y3Z8 333 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 MRASO14807 208 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 KRT6AP02538 564 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 KRT6BP04259 564 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 GNPDA1P46926 289 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 KRT6CP48668 564 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 THOP1P52888 689 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 MTTPP55157 894 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 STX5Q13190 355 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 CAPRIN2Q6IMN6 1127 aaKnown RBP17.84■□□□□ 0.45
USP39-201ENST00000323701 CYP20A1Q6UW02 462 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 UNC5DQ6UXZ4 953 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 ZNF852Q6ZMS4 543 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 TRIM69Q86WT6 500 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 PGAM4Q8N0Y7 254 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 PGBD3Q8N328 593 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 FBXW8Q8N3Y1 598 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 OR2T34Q8NGX1 318 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 INSM2Q96T92 566 aaPredicted RBP17.84■□□□□ 0.45
USP39-201ENST00000323701 MENTQ9BUN1 341 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 SGPP1Q9BX95 441 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 C1QTNF7Q9BXJ2 289 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 LMAN1LQ9HAT1 526 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 USP36Q9P275 1121 aaKnown RBP17.84■□□□□ 0.45
USP39-201ENST00000323701 GPSM3Q9Y4H4 160 aa17.84■□□□□ 0.45
USP39-201ENST00000323701 DNMT3AQ9Y6K1 912 aaPredicted RBP17.84■□□□□ 0.45
USP39-201ENST00000323701 C10orf142B7Z368 130 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 GPR89AB7ZAQ6 455 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 RGS14O43566 566 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 SEC22BO75396 215 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 SLC22A3O75751 556 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 GPR89BP0CG08 455 aa17.83■□□□□ 0.45
USP39-201ENST00000323701 MRPL19P49406 292 aaKnown RBP17.83■□□□□ 0.45
USP39-201ENST00000323701 MAPRE2Q15555 327 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms