RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PIM1P11309 404 aaPredicted RBP13.65□□□□□ -0.22
RPP40-201ENST00000319533 MAGP20916 626 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 GLRBP48167 497 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 ELOAQ14241 798 aaKnown RBP13.65□□□□□ -0.22
RPP40-201ENST00000319533 GRB7Q14451 532 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 BRD3Q15059 726 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 NKG7Q16617 165 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 YOD1Q5VVQ6 348 aaPredicted RBP13.65□□□□□ -0.22
RPP40-201ENST00000319533 PRAMEF13Q5VWM6 474 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 NAPRTQ6XQN6 538 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 COX15Q7KZN9 410 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 LINC00523Q86TU6 105 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 KCNMB4Q86W47 210 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 SLC13A5Q86YT5 568 aaPredicted RBP13.65□□□□□ -0.22
RPP40-201ENST00000319533 OR13J1Q8NGT2 312 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 SLC22A18Q96BI1 424 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 TMEM121Q9BTD3 319 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 MRM3Q9HC36 420 aaKnown RBP13.65□□□□□ -0.22
RPP40-201ENST00000319533 AGPAT4Q9NRZ5 378 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 FBXL4Q9UKA2 621 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 RIMKLBQ9ULI2 386 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 NOVA2Q9UNW9 492 aaKnown RBP13.65□□□□□ -0.22
RPP40-201ENST00000319533 R3HDM2Q9Y2K5 976 aaKnown RBP13.65□□□□□ -0.22
RPP40-201ENST00000319533 CSAG2Q9Y5P2 127 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 HS3ST3B1Q9Y662 390 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 CNTRLQ7Z7A1 2325 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 FITM1A5D6W6 292 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 F8W8V4 182 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 E2F3O00716 465 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 DSCR3O14972 297 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 PRICKLE3O43900 615 aaPredicted RBP13.64□□□□□ -0.23
RPP40-201ENST00000319533 OR1I1O60431 355 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 FKBP9O95302 570 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 S1PR4O95977 384 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 CD9P21926 228 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 ALAS2P22557 587 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 ITGA3P26006 1051 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 STIP1P31948 543 aaKnown RBP13.64□□□□□ -0.23
RPP40-201ENST00000319533 CCR7P32248 378 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 TSFMP43897 325 aaKnown RBP13.64□□□□□ -0.23
RPP40-201ENST00000319533 GDF10P55107 478 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 ACVR1Q04771 509 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 SYTL3Q4VX76 610 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 KIRREL2Q6UWL6 708 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 FAM20CQ8IXL6 584 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 ATG4AQ8WYN0 398 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 CARD6Q9BX69 1037 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 PIH1D1Q9NWS0 290 aaKnown RBP13.64□□□□□ -0.23
RPP40-201ENST00000319533 NXT1Q9UKK6 140 aaKnown RBP13.64□□□□□ -0.23
RPP40-201ENST00000319533 KLK4Q9Y5K2 254 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 CSMD1Q96PZ7 3565 aa13.64□□□□□ -0.23
RPP40-201ENST00000319533 MDC1Q14676 2089 aaKnown RBP13.63□□□□□ -0.23
RPP40-201ENST00000319533 HEATR9A2RTY3 570 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 VSTM2BA6NLU5 285 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 ERI2A8K979 691 aaKnown RBP13.63□□□□□ -0.23
RPP40-201ENST00000319533 LIASO43766 372 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 SUN1O94901 812 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 RPN2P04844 631 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 GRM7Q14831 915 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 CCDC38Q502W7 563 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 ZC3H12BQ5HYM0 836 aaKnown RBP13.63□□□□□ -0.23
RPP40-201ENST00000319533 TCTE1Q5JU00 501 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 AGAP7PQ5VUJ5 663 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 B3GNTL1Q67FW5 361 aaPredicted RBP13.63□□□□□ -0.23
RPP40-201ENST00000319533 FCRL6Q6DN72 434 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 UNC5DQ6UXZ4 953 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 ZNF534Q76KX8 674 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 VRK3Q8IV63 474 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 DCUN1D3Q8IWE4 304 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 SLC34A3Q8N130 599 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 OR52K1Q8NGK4 314 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 OR2L8Q8NGY9 312 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 MAIP1Q8WWC4 291 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 ASZ1Q8WWH4 475 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 HDAC10Q969S8 669 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 AGAP4Q96P64 663 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 TTC1Q99614 292 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 SEMA3GQ9NS98 782 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 CUTCQ9NTM9 273 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 INTS7Q9NVH2 962 aaKnown RBP13.63□□□□□ -0.23
RPP40-201ENST00000319533 IRAK4Q9NWZ3 460 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 IL1RAPL1Q9NZN1 696 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 CDC23Q9UJX2 597 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 ZNF148Q9UQR1 794 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 KLHL20Q9Y2M5 609 aa13.63□□□□□ -0.23
RPP40-201ENST00000319533 USP27XA6NNY8 438 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 TARM1B6A8C7 271 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 SLCO2B1O94956 709 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 GOT2P00505 430 aaKnown RBP13.62□□□□□ -0.23
RPP40-201ENST00000319533 IFNB1P01574 187 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 EDN3P14138 238 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 CDH17Q12864 832 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 HIF1AQ16665 826 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 TSTD2Q5T7W7 516 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 C1QL3Q5VWW1 255 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 FIGLAQ6QHK4 219 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 AFTPHQ6ULP2 937 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 CCDC89Q8N998 374 aa13.62□□□□□ -0.23
RPP40-201ENST00000319533 DNAJB14Q8TBM8 379 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms