RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZNF7P17097 686 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 GPX2P18283 190 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 LPOP22079 712 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 DGKAP23743 735 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PTBP1P26599 531 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 FMO4P31512 558 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 GGT2P36268 569 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CLCNKBP51801 687 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 DSC2Q02487 901 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TAF1AQ15573 450 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CARTPTQ16568 116 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 BICRALQ6AI39 1079 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 MSRB3Q8IXL7 192 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 THEM5Q8N1Q8 247 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 DNAJC22Q8N4W6 341 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF675Q8TD23 568 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 UBTD2Q8WUN7 234 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TADA1Q96BN2 335 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 C19orf43Q9BQ61 176 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 POLE4Q9NR33 117 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 FBXL12Q9NXK8 326 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 B3GNT2Q9NY97 397 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 KCNN3Q9UGI6 736 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 EIF2B4Q9UI10 523 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 NUP50Q9UKX7 468 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 DNAJC25-GNG10A0A024R161 153 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 LRRC14BA6NHZ5 514 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 HCRTO43612 131 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PCDHGA12O60330 932 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 LGI1O95970 557 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ODC1P11926 461 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 C1DQ13901 141 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 SIRPB2Q5JXA9 342 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 NEK5Q6P3R8 708 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 NRARPQ7Z6K4 114 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 MON1AQ86VX9 555 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 HS3ST5Q8IZT8 346 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 COPS5Q92905 334 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ST6GAL2Q96JF0 529 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 EPYCQ99645 322 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 MGLLQ99685 303 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 FAM126AQ9BYI3 521 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 RNF121Q9H920 327 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 EXD2Q9NVH0 621 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 FOCADQ5VW36 1801 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 MEIOCA2RUB1 952 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 KRT87PA6NCN2 255 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 WBP4O75554 376 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 MOCS2O96007 188 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PIPP12273 146 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 HTR6P50406 440 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 APLP1P51693 650 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ELOAQ14241 798 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 DMC1Q14565 340 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 DNAJC14Q6Y2X3 702 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CBLL1Q75N03 491 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TRIM46Q7Z4K8 759 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 LDB1Q86U70 411 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 FAM86B1Q8N7N1 296 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TRNT1Q96Q11 434 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 OR2A14Q96R47 310 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 GTPBP2Q9BX10 602 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 RASSF1Q9NS23 344 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 FKBP14Q9NWM8 211 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 DUSP12Q9UNI6 340 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 U3KQV3 271 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 MYBPHLA2RUH7 354 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CLDN5O00501 218 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 RPLP2P05387 115 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PRPS1L1P21108 318 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ENDOUP21128 410 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ERVPABLB-1P60509 514 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 IRF5Q13568 498 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TRIM60Q495X7 471 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 RFTN2Q52LD8 501 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 SCIMPQ6UWF3 145 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PLPP6Q8IY26 295 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TCTE3Q8IZS6 198 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 OR4F6Q8NGB9 312 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ZFAND1Q8TCF1 268 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 LINGO1Q96FE5 620 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 EGFL8Q99944 293 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 ELOVL6Q9H5J4 265 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 SPON1Q9HCB6 807 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 SPEF1Q9Y4P9 236 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 IQCMA0A1B0GVH7 501 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 EIF3FO00303 357 aaPredicted RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 E2F3O00716 465 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 RFXANKO14593 260 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 STK16O75716 305 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 SNAPC5O75971 98 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 TSPAN12O95859 305 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PEX11BO96011 259 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CNPP09543 421 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 CPN2P22792 545 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 GTF2E2P29084 291 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 PRDX3P30048 256 aaKnown RBP4.66□□□□□ -1.66
PTPN13-201ENST00000316707 RORCP51449 518 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 DUSP28Q4G0W2 176 aa4.66□□□□□ -1.66
PTPN13-201ENST00000316707 BCL7AQ4VC05 210 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms