RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SYF2O95926 243 aaKnown RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 TPM3P06753 285 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 TOP1P11387 765 aaKnown RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 TKTP29401 623 aaKnown RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 MARCKSP29966 332 aaPredicted RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 CORO1AP31146 461 aaKnown RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 HOXA11P31270 313 aaPredicted RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 SYKP43405 635 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 MMP13P45452 471 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 NDUFA8P51970 172 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 BNC1Q01954 994 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 PPIGQ13427 754 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 ETFDHQ16134 617 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 STX1AQ16623 288 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 ZNF674Q2M3X9 581 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 AMZ1Q400G9 498 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 MORN5Q5VZ52 161 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 GALNT17Q6IS24 598 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 OTOAQ7RTW8 1153 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 FAM219AQ8IW50 185 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 PM20D2Q8IYS1 436 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 NUP93Q8N1F7 819 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 CCDC148Q8NFR7 591 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 GDAP1Q8TB36 358 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 CCDC12Q8WUD4 166 aaPredicted RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 SLC38A5Q8WUX1 472 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 SPDL1Q96EA4 605 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 MS4A10Q96PG2 267 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 KATNB1Q9BVA0 655 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 PFDN4Q9NQP4 134 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 VPS54Q9P1Q0 977 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 KLHL9Q9P2J3 617 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 BTBD3Q9Y2F9 522 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 LOXL2Q9Y4K0 774 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 MYH15Q9Y2K3 1946 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 LRRC37AA6NMS7 1700 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 RGPD3A6NKT7 1758 aaPredicted RBP3.9□□□□□ -1.79
SMCO3-201ENST00000316048 RGPD4Q7Z3J3 1758 aa3.9□□□□□ -1.79
SMCO3-201ENST00000316048 MYH2Q9UKX2 1941 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 A0A0U1RQK1 487 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 RPS10-NUDT3A0A1W2PQS6 291 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ZNF320A2RRD8 509 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ANKUB1A6NFN9 424 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 FAM86B1E9PN63 330 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 TMEM178BH3BS89 294 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 VWA5AO00534 786 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SSX4O60224 188 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ECE2O60344 883 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ADCY5O95622 1261 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 FAM86B2P0C5J1 330 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 LINGO3P0C6S8 592 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 PDGFRAP16234 1089 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 KCNA5P22460 613 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 C21orf33P30042 268 aaPredicted RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 RAD23BP54727 409 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 TPM4P67936 248 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SSBP2P81877 361 aaPredicted RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 RBPJQ06330 500 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SLMAPQ14BN4 828 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 GLIPR1L2Q4G1C9 344 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 DNTTIP2Q5QJE6 756 aaKnown RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 OTUD1Q5VV17 481 aaPredicted RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ZDHHC20Q5W0Z9 365 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 RESP18Q5W5W9 173 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 BRAT1Q6PJG6 821 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 OLFM4Q6UX06 510 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 COLCA1Q6ZS62 124 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 TECPR1Q7Z6L1 1165 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ZSCAN30Q86W11 494 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 FOXP4Q8IVH2 680 aaPredicted RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CARNMT1Q8N4J0 409 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CERS5Q8N5B7 392 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ANKRD13CQ8N6S4 541 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ASB5Q8WWX0 329 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 EXOC4Q96A65 974 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CCDC114Q96M63 670 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 OR6C1Q96RD1 312 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SLC22A12Q96S37 553 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 MTERF1Q99551 399 aaKnown RBP3.89□□□□□ -1.79
SMCO3-201ENST00000316048 VPS33BQ9H267 617 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 DPAGT1Q9H3H5 408 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 FZD8Q9H461 694 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 DBNDD1Q9H9R9 158 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 MAD2L2Q9UI95 211 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SNX9Q9Y5X1 595 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SNX5Q9Y5X3 404 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ANKRD31Q8N7Z5 1873 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 LAMB1P07942 1786 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 MYO3BQ8WXR4 1341 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 PRSS51A0A1B0GVH4 220 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 ENO4A6NNW6 628 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SMTNL1A8MU46 457 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 SPRY3O43610 288 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 PSG1P11464 419 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 MPZP25189 248 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 GNA11P29992 359 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 HOXC13P31276 330 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 PCGF2P35227 344 aa3.89□□□□□ -1.79
SMCO3-201ENST00000316048 CAPZA1P52907 286 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms