RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 UNGP13051 313 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 GSTM3P21266 225 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 SP140Q13342 867 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 DNASE1L3Q13609 305 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ZNF773Q6PK81 442 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 GHDCQ8N2G8 530 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ATP6V1C2Q8NEY4 427 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 ZNF641Q96N77 438 aaPredicted RBP13.41□□□□□ -0.26
CLCN6-201ENST00000312413 COL21A1Q96P44 957 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 MIR1-1HGQ9H1L0 117 aa13.41□□□□□ -0.26
CLCN6-201ENST00000312413 KIAA1210Q9ULL0 1709 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 H7C2Y5 167 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 ABCB7O75027 752 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 GNAO1P09471 354 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 ATAD1Q8NBU5 361 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 MTERF1Q99551 399 aaKnown RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 FBXL21Q9UKT6 434 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 FZD1Q9UP38 647 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 M0R036 132 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 KAT7O95251 611 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 MAP3K8P41279 467 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 IQCHQ86VS3 1027 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 ZNF420Q8TAQ5 688 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 GEMIN6Q8WXD5 167 aaKnown RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 PCBD2Q9H0N5 130 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 BRD7Q9NPI1 651 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 TNFRSF10DQ9UBN6 386 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 CD84Q9UIB8 345 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 ZNF208O43345 1280 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 PCDH7O60245 1069 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 APLP1P51693 650 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 SLC10A7Q0GE19 358 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 ARFRP1Q13795 201 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 SFT2D3Q587I9 215 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 PSMG2Q969U7 264 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 PHOX2BQ99453 314 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 BARD1Q99728 777 aaKnown RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 GTPBP2Q9BX10 602 aaKnown RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 B3GNT4Q9C0J1 378 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 CUEDC1Q9NWM3 386 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 LYARQ9NX58 379 aaKnown RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 ARL6IP5O75915 188 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 CDRT1O95170 752 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 OR4Q2P0C623 313 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 GLDCP23378 1020 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 MAN2A2P49641 1150 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 NUDT6P53370 316 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 COL9A3Q14050 684 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 PUM1Q14671 1186 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 XKR4Q5GH76 650 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 PRR23CQ6ZRP0 262 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 CCDC28AQ8IWP9 274 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 SMG7Q92540 1137 aaKnown RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 SCGB3A2Q96PL1 93 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 MAPKAP1Q9BPZ7 522 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 MKKSQ9NPJ1 570 aaPredicted RBP13.4□□□□□ -0.26
CLCN6-201ENST00000312413 RNF6Q9Y252 685 aa13.4□□□□□ -0.26
CLCN6-201ENST00000312413 RENP00797 406 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 IFNA21P01568 189 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 VAMP2P63027 116 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 CLEC12AQ5QGZ9 265 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 ANKRD26P1Q6NSI1 321 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 ARL9Q6T311 187 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 LRRC69Q6ZNQ3 347 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-201ENST00000312413 NIPA2Q8N8Q9 360 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 SETD6Q8TBK2 473 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 SPATA7Q9P0W8 599 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 FZD4Q9ULV1 537 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 SMCO3A2RU48 225 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 A8MT66 165 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 BCAS2O75934 225 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-201ENST00000312413 CSN2P05814 226 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 HOXA10P31260 410 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-201ENST00000312413 GXYLT1Q4G148 440 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 PRPF38BQ5VTL8 546 aaKnown RBP13.39□□□□□ -0.27
CLCN6-201ENST00000312413 NCCRP1Q6ZVX7 275 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-201ENST00000312413 DENND6BQ8NEG7 585 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 ZNF350Q9GZX5 532 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 ELOA3DA6NLF2 546 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-201ENST00000312413 PI15O43692 258 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 SNAPC5O75971 98 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 OR7A10O76100 309 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 PRNPP04156 253 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 ENGP17813 658 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 FPR1P21462 350 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 LHCGRP22888 699 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 VARSP26640 1264 aaKnown RBP13.39□□□□□ -0.27
CLCN6-201ENST00000312413 PPM1AP35813 382 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 PIK3CBP42338 1070 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 AVPR1BP47901 424 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 ENTPD1P49961 510 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 NFKB2Q00653 900 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 DPYSL2Q16555 572 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 ELOA3BQ3SY89 546 aa13.39□□□□□ -0.27
CLCN6-201ENST00000312413 MAP1SQ66K74 1059 aaPredicted RBP13.39□□□□□ -0.27
CLCN6-201ENST00000312413 ELOA3Q8NG57 546 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms