RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 DDR2Q16832 855 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 FAM187BQ17R55 369 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 SLC46A3Q7Z3Q1 461 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 TSPYL5Q86VY4 417 aaPredicted RBP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 AMIGO1Q86WK6 493 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 CHPFQ8IZ52 775 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 COLEC11Q9BWP8 271 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ACTL8Q9H568 366 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 AASDHPPTQ9NRN7 309 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 PDP1Q9P0J1 537 aaPredicted RBP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 NEUROG3Q9Y4Z2 214 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 KCTD3Q9Y597 815 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 SLITRK5O94991 958 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 OR4F21O95013 312 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 HCAR3P49019 387 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 BAK1Q16611 211 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ZNF549Q6P9A3 640 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 DEDD2Q8WXF8 326 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 TIGARQ9NQ88 270 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 NDRG4Q9ULP0 352 aaKnown RBP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ABCG2Q9UNQ0 655 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 FAM50BQ9Y247 325 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 POLR3HQ9Y535 204 aaPredicted RBP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 HSPE1-MOB4S4R3N1 261 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 KIAA0513O60268 411 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 CSF2P04141 144 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 EFNA1P20827 205 aaPredicted RBP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 MAP3K7CLP57077 242 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 TARDBPQ13148 414 aaKnown RBP eCLIP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 GALNT3Q14435 633 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 TSNQ15631 228 aaKnown RBP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 GTDC1Q4AE62 458 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ARMCX4Q5H9R4 360 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 PAMR1Q6UXH9 720 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 Q6ZSR9 355 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ADAMTSL2Q86TH1 951 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ZMIZ2Q8NF64 920 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ST13P5Q8NFI4 369 aaPredicted RBP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ZNF675Q8TD23 568 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 TTC9Q92623 222 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 FCGR1BQ92637 280 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 NTAN1Q96AB6 310 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 SLC9A7Q96T83 725 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 KRT84Q9NSB2 600 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 CCDC182A6NF36 153 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 SNTNA6NMZ2 147 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 MEIS3P2A8K0S8 358 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 PSKH1P11801 424 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 NUDT1P36639 197 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 NUDT6P53370 316 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 RPP38P78345 283 aaKnown RBP17.6■□□□□ 0.41
SPSB4-201ENST00000310546 ITKQ08881 620 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 FAPQ12884 760 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 NR6A1Q15406 480 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 KIAA1614Q5VZ46 1190 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 CACTIN-AS1Q8N1I8 211 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 HHIPL1Q96JK4 782 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 ULBP1Q9BZM6 244 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 E5RI56 91 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 SCELO95171 688 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 HOXA11P31270 313 aaPredicted RBP17.6■□□□□ 0.41
SPSB4-201ENST00000310546 PIK3CBP42338 1070 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 ELP6Q0PNE2 266 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 EFR3AQ14156 821 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 PTGR1Q14914 329 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 MAPKAPK3Q16644 382 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 Q6ZPB1 254 aaPredicted RBP17.6■□□□□ 0.41
SPSB4-201ENST00000310546 CRYBG2Q8N1P7 616 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 SLC13A3Q8WWT9 602 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 TMEM39AQ9NV64 488 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 POLHQ9Y253 713 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 PCDHGB2Q9Y5G2 931 aa17.6■□□□□ 0.41
SPSB4-201ENST00000310546 UGT2B17O75795 530 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 TPPPO94811 219 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 VIPP01282 170 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 HOXA9P31269 272 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 SCAPQ12770 1279 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 PTPRCAPQ14761 206 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 FAM174BQ3ZCQ3 159 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 ESCO2Q56NI9 601 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 KDM4DQ6B0I6 523 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 IL27RAQ6UWB1 636 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 FBXL6Q8N531 539 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 STAG3L4Q8TBR4 150 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 SLC2A13Q96QE2 648 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 C12orf10Q9HB07 376 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 ARNTLO00327 626 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 ECI2O75521 394 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 CCNYL3P0C7X3 344 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 AFF1P51825 1210 aaKnown RBP17.59■□□□□ 0.41
SPSB4-201ENST00000310546 ENTHD1Q8IYW4 607 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 PGBD5Q8N414 524 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 OR52B6Q8NGF0 335 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 APH1BQ8WW43 257 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 PYURFQ96I23 114 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 TBATAQ96M53 351 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 MED10Q9BTT4 135 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 DUSP16Q9BY84 665 aa17.59■□□□□ 0.41
SPSB4-201ENST00000310546 RNF186Q9NXI6 227 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms