RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 SOX30O94993 753 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 KCNH1O95259 989 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 SLC35E2BP0CK96 405 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 HOXB2P14652 356 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 PSMA3P25788 255 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 G0S2P27469 103 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ETV5P41161 510 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 NUDT2P50583 147 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 PRKCQQ04759 706 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ILF3Q12906 894 aaKnown RBP eCLIP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 EPS8Q12929 822 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 SMAD4Q13485 552 aaKnown RBP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 NFYCQ13952 458 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 EML3Q32P44 896 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 LSM12Q3MHD2 195 aaKnown RBP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 Q3ZCU0 254 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 RUNDC3AQ59EK9 446 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 GPRC6AQ5T6X5 926 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 INTS11Q5TA45 600 aaKnown RBP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 EPGNQ6UW88 154 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 IL27RAQ6UWB1 636 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 HACD2Q6Y1H2 254 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 SLC36A4Q6YBV0 504 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 NPAS3Q8IXF0 933 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 PHACTR4Q8IZ21 702 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 TMEM130Q8N3G9 435 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 OR52K2Q8NGK3 314 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 TRPC4APQ8TEL6 797 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 PIH1D2Q8WWB5 315 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ACOX2Q99424 681 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 DPEP2Q9H4A9 486 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 CAB39LQ9H9S4 337 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 CLK4Q9HAZ1 481 aaKnown RBP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 POLE3Q9NRF9 147 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 RUVBL1Q9Y265 456 aaKnown RBP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 AK5Q9Y6K8 562 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 TRIM38O00635 465 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 NUAK1O60285 661 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 TRMUO75648 421 aaKnown RBP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 CLDN7O95471 211 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 IL6P05231 212 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 HEXBP07686 556 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 PIRTP0C851 137 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 CMPK1P30085 196 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 S100A3P33764 101 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 IL12RB1P42701 662 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 RPL5P46777 297 aaKnown RBP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 PCP4P48539 62 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ERVK-8P63133 956 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 RGS1Q08116 209 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ADRM1Q16186 407 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ZNF423Q2M1K9 1284 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 AGKQ53H12 422 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 PRSS36Q5K4E3 855 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 MED27Q6P2C8 311 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 TMEM220Q6QAJ8 160 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 CRTC1Q6UUV9 634 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ZNF438Q7Z4V0 828 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 PGAM4Q8N0Y7 254 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 FNDC8Q8TC99 324 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 GIMAP1Q8WWP7 306 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ITCHQ96J02 903 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 RIOK2Q9BVS4 552 aaKnown RBP5.86□□□□□ -1.47
SEC22A-201ENST00000309934 VN1R3Q9BXE9 311 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 GSDMCQ9BYG8 508 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 ADAM33Q9BZ11 813 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 BTBD1Q9H0C5 482 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 FAIMQ9NVQ4 179 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 TANC1Q9C0D5 1861 aa5.86□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3DA0A087WVF3 549 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3IA0A087WXS9 549 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3EA0A087X179 549 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3KA0A087X1G2 549 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3FA6NER0 549 aaPredicted RBP5.85□□□□□ -1.47
SEC22A-201ENST00000309934 PDZK1P1A8MUH7 402 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3LB9A6J9 549 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 GNGT2O14610 69 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 DYRK3O43781 588 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 SEC22BO75396 215 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TOP3BO95985 862 aaKnown RBP5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3HP0C7X1 549 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 UMPSP11172 480 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 UBL4AP11441 157 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 FGF3P11487 239 aaPredicted RBP5.85□□□□□ -1.47
SEC22A-201ENST00000309934 ADRB3P13945 408 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 CTSEP14091 401 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 PRKAR1BP31321 381 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 ARL4DP49703 201 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 SRSF11Q05519 484 aaKnown RBP5.85□□□□□ -1.47
SEC22A-201ENST00000309934 CST6Q15828 149 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 RFTN2Q52LD8 501 aaPredicted RBP5.85□□□□□ -1.47
SEC22A-201ENST00000309934 SPIN4Q56A73 249 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 FAM78AQ5JUQ0 283 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 PERM1Q5SV97 790 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 ZNF678Q5SXM1 525 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3GQ6DHY5 549 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 TBC1D3CQ6IPX1 549 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 FAM180BQ6P0A1 224 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 PAQR3Q6TCH7 311 aa5.85□□□□□ -1.47
SEC22A-201ENST00000309934 ZNF852Q6ZMS4 543 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms