RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 NETO1Q8TDF5 533 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 ASB11Q8WXH4 323 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 TMEM159Q96B96 161 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 TOX2Q96NM4 488 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 FRG2BQ96QU4 278 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 PANX1Q96RD7 426 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 SLC12A9Q9BXP2 914 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 ZDHHC4Q9NPG8 344 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 COQ6Q9Y2Z9 468 aa11.24□□□□□ -0.61
PTPN2-201ENST00000309660 PRAMEF4O60810 478 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 TULP3O75386 442 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 NTRK1P04629 796 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 THRBP10828 461 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 BDKRB1P46663 353 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 DAG1Q14118 895 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 ZNF284Q2VY69 593 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 SPATS1Q496A3 300 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 PRAMEF9Q5VWM5 478 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 ZCCHC8Q6NZY4 707 aaKnown RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 MICU2Q8IYU8 434 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 TMEM132CQ8N3T6 1108 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 BPIFB1Q8TDL5 484 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 ASZ1Q8WWH4 475 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 USP7Q93009 1102 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 ECHDC3Q96DC8 303 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 SH3GL1Q99961 368 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 HEPHQ9BQS7 1158 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 RDH14Q9HBH5 336 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 SPHK2Q9NRA0 654 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 PADI4Q9UM07 663 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 PCDHGA11Q9Y5H2 935 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 TRIM43BA6NCK2 446 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 TMX2-CTNND1H3BSU7 103 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 CREG1O75629 220 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 C8GP07360 202 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 RHOP08100 348 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 ABCB1P08183 1280 aaPredicted RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 CBSLP0DN79 551 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 CBSP35520 551 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 CTSCP53634 463 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 GRIN2CQ14957 1233 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 GALNT5Q7Z7M9 940 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 RBM23Q86U06 439 aaKnown RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 RAVER1Q8IY67 606 aaKnown RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 TRIM43Q96BQ3 446 aaPredicted RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 LYSMD1Q96S90 227 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 CCDC90BQ9GZT6 254 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 TOR3AQ9H497 397 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 RMND5AQ9H871 391 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 PPT2Q9UMR5 302 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 NEUROG3Q9Y4Z2 214 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 C16orf96A6NNT2 1141 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 PER2O15055 1255 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 ASLP04424 464 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 COX7A2P14406 83 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 AQP1P29972 269 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 KIR3DL1P43629 444 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 SH3BGRP55822 239 aaPredicted RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 PIGFQ07326 219 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 PON2Q15165 354 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 CES5AQ6NT32 575 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 ITCHQ96J02 903 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 ZSWIM3Q96MP5 696 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 MCCC1Q96RQ3 725 aaPredicted RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 REXO4Q9GZR2 422 aaKnown RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 CXorf21Q9HAI6 301 aa11.23□□□□□ -0.61
PTPN2-201ENST00000309660 RC3H2Q9HBD1 1191 aaKnown RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 IFT80Q9P2H3 777 aaPredicted RBP11.23□□□□□ -0.61
PTPN2-201ENST00000309660 E7EQ34 232 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 PTGES3LE9PB15 166 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 LILRB3O75022 631 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 FKBP9O95302 570 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 GBAP04062 536 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ELFN1P0C7U0 828 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 CYP4B1P13584 511 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 SHMT2P34897 504 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 CTNNB1P35222 781 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 MRPL19P49406 292 aaKnown RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 MNX1P50219 401 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ALDH3A2P51648 485 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 SLC14A1Q13336 389 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 PMS2P3Q13401 168 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ARHGAP15Q53QZ3 475 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 RUNDC3AQ59EK9 446 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 FKBP9P1Q75LS8 142 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 LRRC70Q7Z2Q7 622 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 SPRED2Q7Z698 418 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 GRASPQ7Z6J2 395 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ADIPOR2Q86V24 386 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 SGCDQ92629 289 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 ZNF641Q96N77 438 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 DPH2Q9BQC3 489 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-201ENST00000309660 SLC29A3Q9BZD2 475 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 PLXNA4Q9HCM2 1894 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 FADS2P1A8MWK0 482 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 EVPLLA8MZ36 301 aa11.22□□□□□ -0.61
PTPN2-201ENST00000309660 PLK4O00444 970 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms