RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 KCNJ14Q9UNX9 436 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RUVBL1Q9Y265 456 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 RPTORQ8N122 1335 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 STARD9Q9P2P6 4700 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PHLPP1O60346 1717 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PIGBOS1A0A0B4J2F0 54 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 C9orf170A2RU37 121 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TCAPO15273 167 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 HUS1O60921 280 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 IFNA2P01563 188 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 EPOP01588 193 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CXCL10P02778 98 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RB1P06400 928 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NUDT7P0C024 238 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC2A2P11168 524 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 PAX1P15863 534 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CST5P28325 142 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 IL2RGP31785 369 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CEACAM8P31997 349 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 ARL3P36405 182 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SEPHS1P49903 392 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 F2RL1P55085 397 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 H3F3AP84243 136 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SPIBQ01892 262 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SPEM2Q0P670 501 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TWF1Q12792 350 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NAB1Q13506 487 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GPNMBQ14956 572 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CRY1Q16526 586 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 BSXQ3C1V8 233 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PTCHD3Q3KNS1 767 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF667Q5HYK9 610 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF658Q5TYW1 1059 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 CASC4Q6P4E1 433 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LEG1Q6P5S2 330 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NHLRC1Q6VVB1 395 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 MED25Q71SY5 747 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SCN4BQ8IWT1 228 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NHLRC2Q8NBF2 726 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CCDC148Q8NFR7 591 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NEDD1Q8NHV4 660 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC22A8Q8TCC7 542 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ACOT11Q8WXI4 607 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 DVL3Q92997 716 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SKA1Q96BD8 255 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 KTI12Q96EK9 354 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 NSL1Q96IY1 281 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TEPSINQ96N21 525 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SNX18Q96RF0 628 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 RHNO1Q9BSD3 238 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 FUZQ9BT04 418 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 C20orf24Q9BUV8 137 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 OR10A2Q9H208 303 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 KCNN2Q9H2S1 579 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 C8orf33Q9H7E9 229 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SAP30LQ9HAJ7 183 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ADAP2Q9NPF8 381 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GPR108Q9NPR9 543 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ACSS1Q9NUB1 689 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 NHP2Q9NX24 153 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 IGSF9Q9P2J2 1179 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 BAG5Q9UL15 447 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ASF1AQ9Y294 204 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PCDHB3Q9Y5E6 796 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SRPRBQ9Y5M8 271 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 OTOFQ9HC10 1997 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CENPVL1A0A0U1RR11 272 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZC3H12DA2A288 527 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 C4orf47A7E2U8 309 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LMO7DNF2Z398 122 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 H7C0S8 307 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 UBDO15205 165 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GPR39O43194 453 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 B3GALT2O43825 422 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 VENTXO95231 258 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 DEXIO95424 95 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NTRK1P04629 796 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PRLRP16471 622 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF28P17035 718 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 COX5AP20674 150 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SAT1P21673 171 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 PSMB9P28065 219 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SKIV2L2P42285 1042 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 PSMD7P51665 324 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CDC42P60953 191 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ARHGAP8P85298 464 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 HOXC5Q00444 222 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SRSF6Q13247 344 aaKnown RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 LSAMPQ13449 338 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ZNF273Q14593 569 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CCDC85BQ15834 202 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 CA9Q16790 459 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LRRC36Q1X8D7 754 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 HECTD3Q5T447 861 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 BEND3Q5T5X7 828 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SLC30A9Q6PML9 568 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ASCL4Q6XD76 172 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 GAREM2Q75VX8 874 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LRRC28Q86X40 367 aaPredicted RBP1.2□□□□□ -2.22
CEP290-201ENST00000309041 SYT12Q8IV01 421 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms